Parental gene: | PPA2, ENSMODG00000020635 |
| Aliases: | None |
| Description: | pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:28883] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:43323970..43452012(+) |
>ENSMODG00000020635
ATGCGTGTACTGAGACTGCTGCGGCCGCCCAGGCCTCTGCCGGCGCCAAGGTTGAGGCCAAGGCCGAGGCTGCTGCTACT
GGGCTCTGGGGCCGAGCCCTGGGCCGGGCGTTCGTGGCAGTTACCGCCGCCAAAGCCGCTGTCGGTGCTGCTGTCTCCGC
ACCGAGCAATGAGCCAGTACAGCACAGAAGAGCGGGGCAGCCCGCATTCCCCCCAATACCGCCTCTACTTCAAGAATGTA
GCTGGTCACTACATCTCCCCCTTTCATGACATTCCTCTGAAGCCTGAATCTAAAGAGGAGAAAGGCATTCCTACAAAGAA
AGCTCGGACCAGTGAACATGAGGAAGTATTTAATATGGTTGTAGAAATACCTCGTTGGACAAATGCTAAAATGGAGATTG
ACACCAAGGAGCCATTGAATCCCATTAAACAAGATATAAAGAAAGGCAAGCTACGTTATGTGGCAAATATCTTCCCTCAC
AAGGGTTTTATATGGAATTATGGGGCCCTCCCTCAGACTTGGGAAGACCCTTGTCACATAGACTCCATCACCAAGTGCCA
CGGCGATAATGATCCCCTGGACGTTTGTGAAATTGGCTCCAAGGTTCATGCTCCTGGTGACATTATCCAAGTGAAGATTC
TTGGAATTTTGGCCCTTATTGATGGGGATGAGACAGATTGGAAATTAATTGCTATTAGTATTGATGACCCAGAAGCTTCC
AACTTCCATAGTATTGATGATGTGAGGAAGTATAAACCAAATTACCTTGAGGCAACAGTTGACTGGTTCCGATTCTACAA
AGTGCCGGATGGAAAGCCAGAAAATACATTTGGTTTTAATGGAGAGTTTAAAGACAAGGATTTTGCCCATGAAGTAATCG
AATCTACTCACAAATGTTGGAAAGCTTTGCTTCATAAAGAAATTGATCAAGGAGGTATAAAATGCGTCAATGTGAAGATA
AATGATAGCCCTTACTGTTGCAGTGAAGAGGAAGCCAGATCCATAGTGGAGAAGGCATCAGCTTCTGTGGATAAAGATTT
CGTTTCCCAAGAAGATGAAGATATCAACAAGTGGCATTTTATTAAGAAGTAA
ATGCGTGTACTGAGACTGCTGCGGCCGCCCAGGCCTCTGCCGGCGCCAAGGTTGAGGCCAAGGCCGAGGCTGCTGCTACT
GGGCTCTGGGGCCGAGCCCTGGGCCGGGCGTTCGTGGCAGTTACCGCCGCCAAAGCCGCTGTCGGTGCTGCTGTCTCCGC
ACCGAGCAATGAGCCAGTACAGCACAGAAGAGCGGGGCAGCCCGCATTCCCCCCAATACCGCCTCTACTTCAAGAATGTA
GCTGGTCACTACATCTCCCCCTTTCATGACATTCCTCTGAAGCCTGAATCTAAAGAGGAGAAAGGCATTCCTACAAAGAA
AGCTCGGACCAGTGAACATGAGGAAGTATTTAATATGGTTGTAGAAATACCTCGTTGGACAAATGCTAAAATGGAGATTG
ACACCAAGGAGCCATTGAATCCCATTAAACAAGATATAAAGAAAGGCAAGCTACGTTATGTGGCAAATATCTTCCCTCAC
AAGGGTTTTATATGGAATTATGGGGCCCTCCCTCAGACTTGGGAAGACCCTTGTCACATAGACTCCATCACCAAGTGCCA
CGGCGATAATGATCCCCTGGACGTTTGTGAAATTGGCTCCAAGGTTCATGCTCCTGGTGACATTATCCAAGTGAAGATTC
TTGGAATTTTGGCCCTTATTGATGGGGATGAGACAGATTGGAAATTAATTGCTATTAGTATTGATGACCCAGAAGCTTCC
AACTTCCATAGTATTGATGATGTGAGGAAGTATAAACCAAATTACCTTGAGGCAACAGTTGACTGGTTCCGATTCTACAA
AGTGCCGGATGGAAAGCCAGAAAATACATTTGGTTTTAATGGAGAGTTTAAAGACAAGGATTTTGCCCATGAAGTAATCG
AATCTACTCACAAATGTTGGAAAGCTTTGCTTCATAAAGAAATTGATCAAGGAGGTATAAAATGCGTCAATGTGAAGATA
AATGATAGCCCTTACTGTTGCAGTGAAGAGGAAGCCAGATCCATAGTGGAGAAGGCATCAGCTTCTGTGGATAAAGATTT
CGTTTCCCAAGAAGATGAAGATATCAACAAGTGGCATTTTATTAAGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010887 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008731 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000014816 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017004 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005941 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000007086 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022365 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003141 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_638 | 79.32 | 72.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_795 | 75.93 | 73.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_945 | 68.06 | 59.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_946 | 74.36 | 53.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_947 | 74.36 | 53.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000020635 retrocopies