Parental gene: | SAP30BP, ENSMODG00000007562 |
| Aliases: | None |
| Description: | SAP30 binding protein [Source:HGNC Symbol;Acc:30785] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:213348818..213404021(-) |
>ENSMODG00000007562
ATGGCTGGCAAGAAGAACGTTCTGTCGTCGCTGGCGGTTTACGCGGAGGATTCGGAGCCCGAGTCGGACAGCGAGGCAGG
AGTGGAAGCGTCCGGGAGCGCGACAGCAGCGGAGGAAAAAGGTGGCTTAGTGTCTGAAGCCTATGGAGATGATGATTTTT
CTCGACTTGAAGGAGATGAAGATGGTTATGAGGAAGAGGATGAAGAAAACAGCAGACAATCAGAAGATGACGATTCAGAG
ACTGAAAAACCTGAGGCTGATGATCTAAAGGAGTTTTCAGAACTGGAAAAGAGAGATCCCCAGGAGTTGGTTGCTTCCTT
CTCTGAGAGAGTCAGGAACATGTCCCCGGATGAGATTACAATCCCCCCAGAACCACCTGGCAGATGCTCAAATCACCTCC
AGGACAAAATACAGAAACTGTATGAGCGGAAGATAAAGGAAGGGATGGATATGAACTACATTATACAGAGGAAGAAGGAA
TTTCGGAATCCTAGCATCTATGAGAAGCTTATCCAGTTTTGCTCAATTGATGAACTTGGCACCAATTATCCCAAGGATAT
GTTTGATCCCCACGGATGGTCTGAAGACTCCTACTACGAGGCACTAGCCAAAGCTCAGAAGATTGAAATGGACAAATTGG
AAAAAGCCAAAAAGGAAAGGACAAAAGCTTATTGCAGGGACGTGTCTGCAGCGCCTGGGGAGGTGACCGGAGCTGTCCTT
CCCCTGTGCAGGCACCACCTCCTCCTGGGTATTGAATTTGTGACAGGTACCAAGAAGGGCACCACAACCAATGCAGCTGC
CACCACGACCACCACAGCCAGCACCGCAGCTACAGATGCTCAGAAGAGAAAGAGTAAGTGGGATTCTGCTATCCCTGTGA
CAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCGGTCGTCACAGTGACAACTAGTGCAAGTGGC
TCCAAGACTACAGTCATCTCAGCTGTAGGCACCATTGTGAAGAAAGCCAAGCAGTGA
ATGGCTGGCAAGAAGAACGTTCTGTCGTCGCTGGCGGTTTACGCGGAGGATTCGGAGCCCGAGTCGGACAGCGAGGCAGG
AGTGGAAGCGTCCGGGAGCGCGACAGCAGCGGAGGAAAAAGGTGGCTTAGTGTCTGAAGCCTATGGAGATGATGATTTTT
CTCGACTTGAAGGAGATGAAGATGGTTATGAGGAAGAGGATGAAGAAAACAGCAGACAATCAGAAGATGACGATTCAGAG
ACTGAAAAACCTGAGGCTGATGATCTAAAGGAGTTTTCAGAACTGGAAAAGAGAGATCCCCAGGAGTTGGTTGCTTCCTT
CTCTGAGAGAGTCAGGAACATGTCCCCGGATGAGATTACAATCCCCCCAGAACCACCTGGCAGATGCTCAAATCACCTCC
AGGACAAAATACAGAAACTGTATGAGCGGAAGATAAAGGAAGGGATGGATATGAACTACATTATACAGAGGAAGAAGGAA
TTTCGGAATCCTAGCATCTATGAGAAGCTTATCCAGTTTTGCTCAATTGATGAACTTGGCACCAATTATCCCAAGGATAT
GTTTGATCCCCACGGATGGTCTGAAGACTCCTACTACGAGGCACTAGCCAAAGCTCAGAAGATTGAAATGGACAAATTGG
AAAAAGCCAAAAAGGAAAGGACAAAAGCTTATTGCAGGGACGTGTCTGCAGCGCCTGGGGAGGTGACCGGAGCTGTCCTT
CCCCTGTGCAGGCACCACCTCCTCCTGGGTATTGAATTTGTGACAGGTACCAAGAAGGGCACCACAACCAATGCAGCTGC
CACCACGACCACCACAGCCAGCACCGCAGCTACAGATGCTCAGAAGAGAAAGAGTAAGTGGGATTCTGCTATCCCTGTGA
CAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCGGTCGTCACAGTGACAACTAGTGCAAGTGGC
TCCAAGACTACAGTCATCTCAGCTGTAGGCACCATTGTGAAGAAAGCCAAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ficedula albicollis | ENSFALG00000001071 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013106 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017878 | ortholog_one2many | 2 retrogenes | |
| Taeniopygia guttata | ENSTGUG00000008426 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009667 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1207 | 71.88 | 65.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1211 | 72.07 | 65.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1212 | 63.39 | 65.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1602 | 65.73 | 52.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000007562 retrocopies