Parental gene:

LSM3, ENSMODG00000007275

Aliases:None
Description:LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17874]
Organism:Opossum (Monodelphis domestica)
Coordinates:6:249365218..249430176(-)


>ENSMODG00000007275
ATGGCGGACGACGCAGATCAGCAACAGACCACTAACACTGTAGAGGAGCCACTGGATCTCATCAGACTCAGTCTAGATGA
ACGAATATATGTAAAAATGAGAAATGACCGAGAACTACGAGGAAGATTACATGCTTATGATCAGCATTTAAACATGATTT
TGGGAGATGTAGAAGAGACTGTGACAACTATAGAAATTGACGAAGAAACTTATGAGGAGATCTATAAATCAACGAAGCGG
AACATTCCAATGCTGTTTGTCCGAGGAGATGGGGTTGTATTAGTAGCCCCTCCCTTGAGAGTTGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016977 possible_ortholog 1 retrogene
retro_cjac_54,
Gorilla gorilla ENSGGOG00000010006 possible_ortholog 4 retrogenes
retro_ggor_104, retro_ggor_1699, retro_ggor_2068, retro_ggor_826,
Myotis lucifugus ENSMLUG00000010677 possible_ortholog 4 retrogenes
retro_mluc_1148, retro_mluc_2306, retro_mluc_2337, retro_mluc_25,
Oryctolagus cuniculus ENSOCUG00000011088 possible_ortholog 1 retrogene
retro_ocun_126,
Otolemur garnettii ENSOGAG00000007659 possible_ortholog 6 retrogenes
retro_ogar_1031, retro_ogar_231, retro_ogar_242, retro_ogar_2490, retro_ogar_2818, retro_ogar_577,
Oreochromis niloticus ENSONIG00000000370 ortholog_one2many 1 retrogene
retro_onil_12,
Sus scrofa ENSSSCG00000011601 possible_ortholog 6 retrogenes
retro_sscr_1134, retro_sscr_1140, retro_sscr_395, retro_sscr_396, retro_sscr_457, retro_sscr_64,
Vicugna pacos ENSVPAG00000010709 ortholog_one2one 2 retrogenes
retro_vpac_121, retro_vpac_397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_800 50.75 64.71
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Download FASTA sequences of all ENSMODG00000007275 retrocopies