Parental gene:

GTF2H1, ENSMODG00000006540

Aliases:None
Description:general transcription factor IIH, polypeptide 1, 62kDa [Source:HGNC Symbol;Acc:4655]
Organism:Opossum (Monodelphis domestica)
Coordinates:5:242708437..242745432(-)


>ENSMODG00000006540
ATGGCAACTTCATCAGAAGAAGTTTTACTGATTGTAAAGAAGGTACGTCAAAAGAAGCAGGATGGAGCCCTGTACCTCAT
GGCAGAAAGGATCGCTTGGGCACCTGAAGGCAAAGACAGATTTACAATCAGCCATATGTATGCGGACATTAAATGCCAGA
AAATCAGTCCAGAAGGAAAAGCTAAAATCCAGCTTCAGCTGGTGCTACATGCAGGAGACACTACTAATTTCCATTTTTCC
AATGAAAGCACAGCTATAAAGGAGCGAGATGCTGTGAAAGATCTTCTTCAGCAGTTGCTACCCAAATTCAAGAGGAAAGC
CAATAAAGAACTGGAAGAGAAAAACAGAATGCTGCAAGAGGATCCTGTTTTGTTTCAGCTTTATAAAGACCTGGTGGTGA
GTCAGGTGATCAGTGCTGAGGAATTTTGGGCCAATCGTTTAAGCATGAATACTGTGGATAGCCCTGCAGCATCCAATCAC
AAGCAAGATGTGGGCATTTCTGCAGCATTTCTGGCTGATGTCCGCCCTCAGACAGATGGCTGTAATGGCCTAAGGTATAA
TTTAACCTCTGATATCATTGAGTCCATATTTAGGACCTACCCAGCAGTAAAAATGAAATATGCAGAAAATGTTCCACATA
ACATGACAGAAAAAGAGTTCTGGACAAGATTTTTTCAATCCCATTATTTTCATAGGGATCGACTTAACACAGGGTCAAAA
GATCTCTTTGCAGAATGTGCCAAAATGGATGAAAAGGGTTTAAAAACAATGGTATCTCTAGGAGTGAAAAACCCCCTACT
AGATTTGACAGCACTGGAGGATAAATCATTAGATGAGGGCTATGGAGTTTCCCCTGTGCCATCTACTTCCAACTCTTCGA
AATCCATAAAGGAGAACAGCAATGCCGCAATCATCAAGAGATTTAACCATCATAGTGCCATGGTCCTGGCAGCAGGTCTC
AGGAAACAAGAAGCACAACATGATCACAATGAGAACAACAGCACAGATGGGAATTCTCGGGATTCAGACTTCTTTCAGCC
ACCAGTCAAAAGGGTGAAGTTACAGGAATCCATTGAATATGAAGACTTGGGGAAAAATAACAACATAAAAACTATTGCAC
TAAGCCTAAAGAAGTCAGATAGGTATTATCACGGTCCAACACCAATTCAGTCCCTCCAGTATGCAACAAGTCAGGATATT
ATCAATTCTTTTCAGAGTATTAAGCAAGAGATGGAAACTTACACACCCAAACTAACTCAGGTTCTTTCAAGTGGTGCTGC
AAGTAGTACCATCACGGCCCTATCCCCTGGAGGAGCACTTATGCAGGGAGGACCACAGCAAGCCATAAACCAGATGGTGC
CAAGTGACATTCAGTCAGAACTCAAACACTTGTATGTGGCTGTGGGAGAGCTGCTGAGGCATTTCTGGTCCTGTTTTCCA
GTTAACACACCATTCCTAGAAGAAAAGGTAGTAAGGATGAAGAATAATTTGGAACGATTCCAAGCTACTAAGCTCTGCCC
ATTCCAAGAAAAAATTCGGAGACAGTATTTAAGCACAAATTTGATAAGTCACATAGAAGAGATGTTGCAGACAGCCTACA
ATAAACTCCACACATGGCAGTCCAGGCGCTTGCTAAAGAAGACGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000110768 ortholog_one2one 1 retrogene
retro_hsap_1892,
Gorilla gorilla ENSGGOG00000008405 ortholog_one2one 1 retrogene
retro_ggor_1385,
Nomascus leucogenys ENSNLEG00000017760 ortholog_one2one 1 retrogene
retro_nleu_1473,
Otolemur garnettii ENSOGAG00000000710 ortholog_one2one 1 retrogene
retro_ogar_338,
Pan troglodytes ENSPTRG00000003420 ortholog_one2one 1 retrogene
retro_ptro_1269,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1210 84.84 99.82
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Download FASTA sequences of all ENSMODG00000006540 retrocopies