Parental gene: | SUGP1, ENSMMUG00000028834 |
| Aliases: | SUGP1, SF4 |
| Description: | SURP and G patch domain containing 1 [Source:HGNC Symbol;Acc:18643] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 19:18929041..18979621(-) |
>ENSMMUG00000028834
ATGGACAACCGGGATGTTGCAGGAAAGGCTAACCGGTGGTTTGGGGTTGCTCCCCCTAAATCTGGAAAAATGAACATGAA
CATCCTTCACCAGGAAGAACTCATCGCTCAGAAGAAACGGGAAATTGAAGCCAAAATGGAACAGAAAGCCAAGCAGAATC
AGGTGGCCACCCCTCAGCCCCCACATCCTGGCGAAATCACAAATGCACACAACTCTTCCTGCGTTTCCAACAAGTTTGCC
AACGATGGTAGCTTCTTGCAGCAGTTTCTGAAGTTGCAGAAGGCACAGACCAGCACAGATGCCCCGCCCAGTGCTCCCAG
CGCCCCTCCCAGCACACCCACCCCCAGTGCCGGGAAGAGGTCCCTGCTCATCAGCAGGCGGACAGGCCTGGGGCTGACTA
GCCTGCCAGGCCCCATGAAGAGCTACTCCCACGCCAAGCAGCTGCCCGTGGCACACCGCCCAAGTGTCTTCCAGTCCCCC
GATGAGGACGAGGAGGAGGACTATGAGCAGTGGCTGGAGATCAAAGTGTGTCTCACCAAGACAGTGAGACCAACTCCCCC
CTCATCATGGTGTTTTGTGCCTGGACTCGGGACGCCCGACAGCCTCCTGCATCTCACACTCTTCTCCCCCCACCCCTCTG
TCGTTGTGGTCCGTAGAGAGAGTGTGCCTATTGACTGTGGGGTGTGTGAGTTGAACCCCAGTACTGACAGCCTCCTTAAA
GTTTCACCCCCAGAGGGAGCCGAGACTCGGAAAGTGATAGAGAAATTGGCCCGCTTTGTGGCAGAAGGAGGCCCCGAGTT
AGAAAAAGTAGCTATGGAGGACTACAAGGATAACCCAGCATTTGCATTTTTGCACGATAAGAATAGCAGGGAATTCCTCT
ACTACAGGAAGAAGGTGGCTGAGATAAGAAAGGAAGCACAGAAGTCGCAGGCAGCCTCTCAGAAAGTTTCACCCCCAGAG
GACGAAGAGGTCAAGAACCTTGCAGAAAAGTTGGCCAGGTTCATAGCGGACGGGGGTCCCGAGGTGGAAACCATTGCCCT
CCAGAACAACCGTGAGAACCAGGCATTCAGCTTTCTGTACGAGCCCAACAGCCAAGGGTACAAGTACTACCGACAGAAGC
TGGAGGAGTTCCGGAAAGCCAAGGCCAGCTCCACAGGCAGCCTCACAGCACCCGACCCCGGCCTGAAGCGCAAGTCCCCG
CCTGAAGCCCTGTCAGGGTCCTTACCCCCAGCCACCACCTGCCCCGCCTCATCCACGCCTGTGCCCACCGTCATCCCTGC
TCCAGCTGCCCCTGGGAAGCCAGCCTCCGCAGCTACCGTGAAGAGGAAGCGGAAGAGCCGGTGGGGGCCTGAAGAGGATA
AAGTAGAGCTCCCACCTGCTGAGCTGGTGCAGAGGGACGTGGACGCCTCTCCCTCACCTCTGTCAGTTCAGGACCTCAAG
GGGCTTGGCTATGAGAAGGGGAAGCCTGTGGGTCTAGTGGGTGTCACAGAGCTGTCGGATGCCCAGAAGAAGCAGCTGAA
GGAGCAGCAGGAGATGCAGCAGATGTACGACATGATCATGCAGCACAAGCGGGCCATGCAGGACATGCAGCTGCTGTGGG
AAAAGGCAGTGCAGCAGCACCAGCACGGCTACGACAGCGATGAGGAGGTGGACAGCGAGCTGGGCACCTGGGAGCACCAG
CTGCGGCGCATGGAGATGGACAAGACCAGGGAATGGGCCGAGCAACTGACAAAGATGGGCCGGGGCAAGCACTTCATCGG
AGACTTCCTGCCTCCAGACGAGCTGGAGAAGTTTATGGAGACCTTCAAGGCCCTGAAGGAGGGCCGCGAGCCTGACTACT
CGGAGTACAAGGAGTTCAAGCTGACTGTGGAGAACATTGGCTACCAGATGCTGATGAAGATGGGCTGGAAAGAGGGCGAG
GGGCTGGGTTCGGAAGGCCAGGGCATCAAGAACCCGGTGAACAAGGGCACCACCACAGTGGACGGTGCCGGCTTCGGCAT
TGACCGCCCGGCCGAGCTTTCCAAGGAGGACGATGAGTACGAGGCCTTCCGCAAGAGGATGATGCTGGCCTACCGCTTCC
GGCCCAACCCCCTGAATAACCCTAGACGGCCTTACTACTGA
ATGGACAACCGGGATGTTGCAGGAAAGGCTAACCGGTGGTTTGGGGTTGCTCCCCCTAAATCTGGAAAAATGAACATGAA
CATCCTTCACCAGGAAGAACTCATCGCTCAGAAGAAACGGGAAATTGAAGCCAAAATGGAACAGAAAGCCAAGCAGAATC
AGGTGGCCACCCCTCAGCCCCCACATCCTGGCGAAATCACAAATGCACACAACTCTTCCTGCGTTTCCAACAAGTTTGCC
AACGATGGTAGCTTCTTGCAGCAGTTTCTGAAGTTGCAGAAGGCACAGACCAGCACAGATGCCCCGCCCAGTGCTCCCAG
CGCCCCTCCCAGCACACCCACCCCCAGTGCCGGGAAGAGGTCCCTGCTCATCAGCAGGCGGACAGGCCTGGGGCTGACTA
GCCTGCCAGGCCCCATGAAGAGCTACTCCCACGCCAAGCAGCTGCCCGTGGCACACCGCCCAAGTGTCTTCCAGTCCCCC
GATGAGGACGAGGAGGAGGACTATGAGCAGTGGCTGGAGATCAAAGTGTGTCTCACCAAGACAGTGAGACCAACTCCCCC
CTCATCATGGTGTTTTGTGCCTGGACTCGGGACGCCCGACAGCCTCCTGCATCTCACACTCTTCTCCCCCCACCCCTCTG
TCGTTGTGGTCCGTAGAGAGAGTGTGCCTATTGACTGTGGGGTGTGTGAGTTGAACCCCAGTACTGACAGCCTCCTTAAA
GTTTCACCCCCAGAGGGAGCCGAGACTCGGAAAGTGATAGAGAAATTGGCCCGCTTTGTGGCAGAAGGAGGCCCCGAGTT
AGAAAAAGTAGCTATGGAGGACTACAAGGATAACCCAGCATTTGCATTTTTGCACGATAAGAATAGCAGGGAATTCCTCT
ACTACAGGAAGAAGGTGGCTGAGATAAGAAAGGAAGCACAGAAGTCGCAGGCAGCCTCTCAGAAAGTTTCACCCCCAGAG
GACGAAGAGGTCAAGAACCTTGCAGAAAAGTTGGCCAGGTTCATAGCGGACGGGGGTCCCGAGGTGGAAACCATTGCCCT
CCAGAACAACCGTGAGAACCAGGCATTCAGCTTTCTGTACGAGCCCAACAGCCAAGGGTACAAGTACTACCGACAGAAGC
TGGAGGAGTTCCGGAAAGCCAAGGCCAGCTCCACAGGCAGCCTCACAGCACCCGACCCCGGCCTGAAGCGCAAGTCCCCG
CCTGAAGCCCTGTCAGGGTCCTTACCCCCAGCCACCACCTGCCCCGCCTCATCCACGCCTGTGCCCACCGTCATCCCTGC
TCCAGCTGCCCCTGGGAAGCCAGCCTCCGCAGCTACCGTGAAGAGGAAGCGGAAGAGCCGGTGGGGGCCTGAAGAGGATA
AAGTAGAGCTCCCACCTGCTGAGCTGGTGCAGAGGGACGTGGACGCCTCTCCCTCACCTCTGTCAGTTCAGGACCTCAAG
GGGCTTGGCTATGAGAAGGGGAAGCCTGTGGGTCTAGTGGGTGTCACAGAGCTGTCGGATGCCCAGAAGAAGCAGCTGAA
GGAGCAGCAGGAGATGCAGCAGATGTACGACATGATCATGCAGCACAAGCGGGCCATGCAGGACATGCAGCTGCTGTGGG
AAAAGGCAGTGCAGCAGCACCAGCACGGCTACGACAGCGATGAGGAGGTGGACAGCGAGCTGGGCACCTGGGAGCACCAG
CTGCGGCGCATGGAGATGGACAAGACCAGGGAATGGGCCGAGCAACTGACAAAGATGGGCCGGGGCAAGCACTTCATCGG
AGACTTCCTGCCTCCAGACGAGCTGGAGAAGTTTATGGAGACCTTCAAGGCCCTGAAGGAGGGCCGCGAGCCTGACTACT
CGGAGTACAAGGAGTTCAAGCTGACTGTGGAGAACATTGGCTACCAGATGCTGATGAAGATGGGCTGGAAAGAGGGCGAG
GGGCTGGGTTCGGAAGGCCAGGGCATCAAGAACCCGGTGAACAAGGGCACCACCACAGTGGACGGTGCCGGCTTCGGCAT
TGACCGCCCGGCCGAGCTTTCCAAGGAGGACGATGAGTACGAGGCCTTCCGCAAGAGGATGATGCTGGCCTACCGCTTCC
GGCCCAACCCCCTGAATAACCCTAGACGGCCTTACTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 43 .23 RPM |
| SRP007412_brain | 25 .88 RPM |
| SRP007412_cerebellum | 27 .12 RPM |
| SRP007412_heart | 22 .08 RPM |
| SRP007412_kidney | 20 .54 RPM |
| SRP007412_liver | 28 .18 RPM |
| SRP007412_testis | 111 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005755 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005329 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2040 | 78.39 | 81.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000028834 retrocopies