Parental gene:

PPIL4, ENSMMUG00000023067

Aliases:None
Description:peptidyl-prolyl cis-trans isomerase-like 4 [Source:RefSeq peptide;Acc:NP_001245084]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:113748233..113789282(+)


>ENSMMUG00000023067
ATGGCGGTTCTGCTAGAGACCACTTTGGGCGACGTCGTCATCGACTTGTACACCGAGGAGCGGCCGCGTGCCTGCTTGAA
TTTCTTGAAATTGTGCAAAATAAAATATTACAATTATTGCCTGATTCACAATGTACAGAGGGACTTTATCATACAAACTG
GCGATCCTACAGGGACTGGCCGTGGAGGAGAGTCTATTTTTGGCCAACTGTATGGTGATCAAGCAAGCTTTTTTGAGGCA
GAAAAAGTCCCAAGAATTAAGCACAAGAAGAAAGGCACAGTGTCCATGGTGAATAATGGCAGTGATCAACATGGATCTCA
GTTTCTTATCACTACAGGAGAAAATCTAGATTACCTTGATGGTGTCCATACAGTGTTTGGTGAGGTGACAGAAGGCATGG
ACATAATTAAGAAAATTAATGAGACCTTTGTTGACAAGGACTTTGTACCATATCAGGATATAAGGATAAATCATACAGTG
ATTTTAGATGATCCATTTGATGACCCTCCTGATTTATTAATCCCTGATCGATCACCAGAACCTACAAGGGAACAATTAGA
TAGTGGTCGAATAGGAGCAGATGAAGAAATTGATGATTTCAAAGGAAGATCAGCTGAGGAAGTAGAAGAAATAAAGGCAG
AAAAAGAGGCTAAAACTCAGGCTATACTTTTAGAGATGGTGGGAGACCTACCTGATGCAGATATTAAACCTCCAGAAAAT
GTACTGTTTGTGTGTAAATTGAACCCAGTGACCACAGATGAGGATCTGGAAATAATATTCTCTAGATTTGGGCCAATAAG
AAGTTGTGAAGTTATCCGGGACTGGAAGACAGGAGAGTCCCTCTGTTATGCTTTTATTGAATTTGAAAAGGAAGAAGATT
GTGAGAAAGCATTCTTCAAAATGGACAATGTACTTATAGATGACAGAAGAATACATGTGGATTTTAGCCAGTCTGTTGCA
AAGGTTAAATGGAAAGGAAAAGGTGGGAAATACACCAAGAGTGATTTCAAGGAGTATGAAAAAGAACAGGATAAACCATC
TAATTTGGTTCTGAAAGATAAAGTAAAGCCCAAACAGGATGCAAAATATGATCTTATATTAGATGAGCAGGCCGAAGACT
CAAAATCAGGTCACTCACACACAAGTAAAAAACACAAGAAGAAAACCCGTCACTGCTCTGAAGAGAAAGAAGATGAGGAC
TATATACCAATCAAAAATACTAATCAGGATATCTATAGAGAAATGGGGTTTGGTCACTATGAAGAAGAAGAAAGCTGTTG
GGAGAAACAGAAGAGTGAAAAGAGAGACCGAACTCAGAACCGAAGTCGCAGCCGATCTCGAGAGAGGGATGGCCATTACA
GTAATAGTCACAAGTCAAAATACCAAACAGATTTTTATGAAAGAGAAAGGAGTAAAAAGAGAGACCGAAGCAGAAGTCCA
AAGAAATCCAAAGATAAAGAAAAATCTAAGTACAGATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .78 RPM
SRP007412_brain 7 .51 RPM
SRP007412_cerebellum 7 .68 RPM
SRP007412_heart 5 .83 RPM
SRP007412_kidney 6 .46 RPM
SRP007412_liver 1 .58 RPM
SRP007412_testis 7 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019613 ortholog_one2one 1 retrogene
retro_cjac_2963,
Macaca mulatta ENSMMUG00000013129 other_paralog 1 retrogene
retro_mmul_1124,
Nomascus leucogenys ENSNLEG00000015316 ortholog_one2one 1 retrogene
retro_nleu_173,
Oryctolagus cuniculus ENSOCUG00000007696 ortholog_one2one 2 retrogenes
retro_ocun_661, retro_ocun_892,
Taeniopygia guttata ENSTGUG00000010655 ortholog_one2many 1 retrogene
retro_tgut_16,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1715 85.28 52.85
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Download FASTA sequences of all ENSMMUG00000023067 retrocopies