Parental gene: | MMU.3939, ENSMMUG00000020928 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 13:127979539..127989406(-) |
>ENSMMUG00000020928
ATGGCGGCTTTTTCTGGCCCAGCTGGGCCGATCCTGTCGCTTAACCCGCAGGAAGATGCCGAGTTTCAAAAGGAGGTGGC
GCAGGTTCGCAAGCGCATAACCCAGCGGAAAAAACAAGAACGACTTACTTCTGGAGTAGTCTATGTGGGCCACCTACCTA
ACCTACTTAACGAAACCCAGATCTTTTCGTATTTCTCCCAGTTTGGCACTGTGACACGATTCAGACTGTCCAGAAGTAAA
AGGACTGGAAATAGCAAAGGCTATGCATTTGTGGAGTTTGAGTCTGAGGATGTTGCCAAGATAGTTGCTGAAACAATGAA
CAACTACCTGTTTGGTGAAAGACTCCTGGAGTGTCATTTTATGCCACCTGAAAAAGTACATAAAGAACTCTTTAAAGACT
GGAATATTCCATTTAAGCAGCCATCACATCCATCAGTGAAACGGTATAATCGGAATCGGACACTAACACAAAAGCTACGG
ATGGAGGAGCGATTTAAAAAGAAAGAAAGATTACTCAGGAAGAAATTAGCCAAAAAAGGAATTGATTATGATTTTCCTTC
CTTGATTTTGCAGAAAACGGAAGGTGTTTCAAAAACTAATCGTCAGACGTCCACGAAAGGCCAGGTTTTACGTAAGAAGA
AGAAAAAAGTTTTAGGTACTCCCAACGTTCCTGAGAAGACTGTGGATAGCCAGGGCCCCACACCAGTTTGTACACCAACA
TTTTTGGAGAGGAGAAAATCTGAAGTGGCTGAACTGAATGATGATGATAAAGATAATGAAATAGTTTTCAAAGAGCCCAT
ATCCTGTGTAAAAGAAGAAATACAAGAGACTCAAACACCTACACATTCACGGAAAAAAAGACGAAGAAAAAGCAATCAGT
GA
ATGGCGGCTTTTTCTGGCCCAGCTGGGCCGATCCTGTCGCTTAACCCGCAGGAAGATGCCGAGTTTCAAAAGGAGGTGGC
GCAGGTTCGCAAGCGCATAACCCAGCGGAAAAAACAAGAACGACTTACTTCTGGAGTAGTCTATGTGGGCCACCTACCTA
ACCTACTTAACGAAACCCAGATCTTTTCGTATTTCTCCCAGTTTGGCACTGTGACACGATTCAGACTGTCCAGAAGTAAA
AGGACTGGAAATAGCAAAGGCTATGCATTTGTGGAGTTTGAGTCTGAGGATGTTGCCAAGATAGTTGCTGAAACAATGAA
CAACTACCTGTTTGGTGAAAGACTCCTGGAGTGTCATTTTATGCCACCTGAAAAAGTACATAAAGAACTCTTTAAAGACT
GGAATATTCCATTTAAGCAGCCATCACATCCATCAGTGAAACGGTATAATCGGAATCGGACACTAACACAAAAGCTACGG
ATGGAGGAGCGATTTAAAAAGAAAGAAAGATTACTCAGGAAGAAATTAGCCAAAAAAGGAATTGATTATGATTTTCCTTC
CTTGATTTTGCAGAAAACGGAAGGTGTTTCAAAAACTAATCGTCAGACGTCCACGAAAGGCCAGGTTTTACGTAAGAAGA
AGAAAAAAGTTTTAGGTACTCCCAACGTTCCTGAGAAGACTGTGGATAGCCAGGGCCCCACACCAGTTTGTACACCAACA
TTTTTGGAGAGGAGAAAATCTGAAGTGGCTGAACTGAATGATGATGATAAAGATAATGAAATAGTTTTCAAAGAGCCCAT
ATCCTGTGTAAAAGAAGAAATACAAGAGACTCAAACACCTACACATTCACGGAAAAAAAGACGAAGAAAAAGCAATCAGT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .35 RPM |
| SRP007412_brain | 9 .41 RPM |
| SRP007412_cerebellum | 11 .24 RPM |
| SRP007412_heart | 7 .36 RPM |
| SRP007412_kidney | 9 .74 RPM |
| SRP007412_liver | 3 .21 RPM |
| SRP007412_testis | 10 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019387 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000002227 | ortholog_one2many | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013386 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000005017 | ortholog_one2many | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008535 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000155438 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023498 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000030731 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015787 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006481 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000000152 | ortholog_many2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001163 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000025875 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012419 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000016707 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000006252 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001123 | ortholog_one2many | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000005847 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_690 | 75.69 | 86.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_696 | 76.38 | 85.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_697 | 77.20 | 84.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_752 | 78.92 | 62.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_1444 | 77.96 | 62.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_1544 | 60.98 | 53.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmul_2149 | 78.70 | 56.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmul_2151 | 77.65 | 86.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmul_2225 | 74.61 | 86.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmul_2226 | 79.88 | 56.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmul_2389 | 76.90 | 94.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000020928 retrocopies