Parental gene:

MMU.13490, ENSMMUG00000020441

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:10529206..10534035(-)


>ENSMMUG00000020441
ATGAACAACTTTGGTAATGAAGAATTTGACTGCCACTTCCTCGATGAAGGTTTTACTGCCAAGGACATTCTGGACCAAAA
AATTAATGAAGTTTCTTTTTCTGATGATAAGGATGCCTTCTATGTGGCAGACCTGGGAGACATTCTAAAGAAACATCTGA
GGTGGTTAAAAGCTCTCCCTCGTGTCACCCCCTTTTATGCAGTCAAATGTAATGATAGCAAAGCCATCGTGAAGACCCTT
GCTGCTGTCGGGACAGGATTTGACTGTGCTAGCAAGACTGAAATACAGTTGGTGCAGAATCTGGGGGTGCCTCCAGAGAG
GATTATCTATGCAAATCCTTGTAAACAAGTATCTCAAATTAAGTATGCTGCTAATAATGGAGTCCAGATGATGACTTTTG
ATAGTGAAGTTGAGTTGATGAAAGTTACCAGAGCACATCCAAAAGCAAAGTTGGTTTTGCGGATTGCCACTGATGATTCC
AAAGCAGTCTGTCGTCTCAGTGTTAAATTCGGTGCCACGCTCAGAAATAGCAGGCTCCTTTTGGAACGGGCAAAAGAGCT
GAATATCGATGTCGTTGGTGTCAGCTTCCATGTAGGAAGCGGCTGTACCGATCCTGAGACCTTCGTGCAGGCAATCTCTG
ATGCCCGCTGTGTTTTTGACATGGGGGCTGAGGTTGGTTTCAGCATGTATCTCCTTGATATTGGCGGTGGCTTTCCTGGA
TCTGAGGAAGTGAAGCTTAAATTTGAAGAGATCACCAACGTAATCAACCCAGCGCTGGACAAATATTTTCCGGCAGACTC
TGGAGTGAGAATCATAGCTGAGCCCGGCAGATACTATGTTGCATCAGCTTTCACACTTGCGGTTAATATCATCGCCAAGA
AAATTGTATTAAAGGAACAGACTGGCTCTGATGATGAGGATGAGTCGAGTGAACAGACCTTTATGTATTATGTGAATGAT
GGCGTCTATGGATCATTTAATTGCATACTGTATGATCACGCACATGTAAAGCCCCTTCTGCAAAAGAGACCTAAACCAGA
TGAGAAGTATTATTCATCCAGCATATGGGGACCAACATGTGATGGCCTTGATCGGATTGTTGAGCGCTGTGACCTGCCCG
AAATGCATGTGGGTGATTGGATGCTCTTTGAAAACATGGGTGCTTACACTGTTGCTGCTGCCTCTACGTTCAATGGCTTC
CAGAGGCCGACGATCTACTATGTGATGTCAGGGCCTGCGTGGCAACTCATGCAGCAATTCCAGAACCCCGACTTTCCACC
CGAAGTAGAGGAACAGGACGCCAGCACCCTGCCTGTGTCTTGTGCCTGGGAGAGTGGGATGAAACGCCACCCAGCAGCCT
GTGCTTCAGCTGGTATTAATGTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .47 RPM
SRP007412_brain 15 .58 RPM
SRP007412_cerebellum 26 .02 RPM
SRP007412_heart 36 .57 RPM
SRP007412_kidney 80 .51 RPM
SRP007412_liver 36 .06 RPM
SRP007412_testis 182 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011415 possible_ortholog 1 retrogene
retro_amel_414,
Bos taurus ENSBTAG00000004256 possible_ortholog 1 retrogene
retro_btau_552,
Choloepus hoffmanni ENSCHOG00000010898 possible_ortholog 2 retrogenes
retro_chof_1618, retro_chof_2111,
Callithrix jacchus ENSCJAG00000006576 ortholog_one2many 2 retrogenes
retro_cjac_3170, retro_cjac_3857,
Dasypus novemcinctus ENSDNOG00000018474 ortholog_many2many 31 retrogenes
retro_dnov_1032, retro_dnov_1128, retro_dnov_1129, retro_dnov_1137, retro_dnov_1212, retro_dnov_1235, retro_dnov_1418, retro_dnov_1434, retro_dnov_1493, retro_dnov_1594, retro_dnov_1595, retro_dnov_1677, retro_dnov_1778, retro_dnov_1810, retro_dnov_1813, retro_dnov_2016, retro_dnov_2027, retro_dnov_2108, retro_dnov_2147, retro_dnov_2180, retro_dnov_2212, retro_dnov_2461, retro_dnov_2551, retro_dnov_2564, retro_dnov_392, retro_dnov_740, retro_dnov_766, retro_dnov_781, retro_dnov_923, retro_dnov_943, retro_dnov_958,
Equus caballus ENSECAG00000022690 possible_ortholog 2 retrogenes
retro_ecab_1002, retro_ecab_957,
Loxodonta africana ENSLAFG00000005330 possible_ortholog 2 retrogenes
retro_lafr_218, retro_lafr_850,
Myotis lucifugus ENSMLUG00000010423 possible_ortholog 1 retrogene
retro_mluc_281,
Monodelphis domestica ENSMODG00000014779 ortholog_many2many 1 retrogene
retro_mdom_262,
Mustela putorius furo ENSMPUG00000013321 possible_ortholog 1 retrogene
retro_mputfur_1272,
Mus musculus ENSMUSG00000011179 possible_ortholog 12 retrogenes
retro_mmus_2588, retro_mmus_2744, retro_mmus_2745, retro_mmus_2746, retro_mmus_2747, retro_mmus_2834, retro_mmus_2922, retro_mmus_3237, retro_mmus_3677, retro_mmus_503, retro_mmus_912, retro_mmus_984,
Nomascus leucogenys ENSNLEG00000013820 ortholog_one2many 1 retrogene
retro_nleu_1119,
Pongo abelii ENSPPYG00000012654 ortholog_one2many 1 retrogene
retro_pabe_3090,
Ictidomys tridecemlineatus ENSSTOG00000000386 possible_ortholog 2 retrogenes
retro_itri_1751, retro_itri_801,
Tursiops truncatus ENSTTRG00000004611 possible_ortholog 3 retrogenes
retro_ttru_1940, retro_ttru_731, retro_ttru_843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_157 93.93 100.00
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2. retro_mmul_1645 69.74 58.13
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Download FASTA sequences of all ENSMMUG00000020441 retrocopies