Parental gene:

MMU.12923, ENSMMUG00000017704

Aliases:None
Description:eukaryotic translation initiation factor 1b [Source:RefSeq peptide;Acc:NP_001244814]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:96226864..96228928(-)


>ENSMMUG00000017704
ATGTCCACTATCCAGAACCTCCAATCTTTCGACCCCTTTGCTGATGCAACTAAGGGTGACGACTTACTCCCGGCAGGGAC
TGAGGATTACATTCATATAAGAATCCAGCAACGGAACGGCAGAAAGACACTGACTACTGTTCAGGGCATTGCAGATGATT
ATGACAAAAAGAAACTTGTGAAAGCTTTCAAAAAGAAATTTGCCTGTAATGGTACTGTGATTGAACATCCTGAATACGGA
GAGGTTATTCAGCTTCAAGGTGACCAAAGAAAAAACATTTGCCAGTTTCTCTTGGAGGTTGGCATTGTCAAGGAGGAACA
GCTTAAGGTTCATGGATTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 32 .68 RPM
SRP007412_brain 37 .65 RPM
SRP007412_cerebellum 26 .09 RPM
SRP007412_heart 62 .71 RPM
SRP007412_kidney 19 .37 RPM
SRP007412_liver 6 .65 RPM
SRP007412_testis 33 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013689 ortholog_one2one 4 retrogenes
retro_dord_179, retro_dord_307, retro_dord_626, retro_dord_669,
Echinops telfairi ENSETEG00000017295 ortholog_one2one 5 retrogenes
retro_etel_1228, retro_etel_1480, retro_etel_1793, retro_etel_31, retro_etel_4,
Microcebus murinus ENSMICG00000013223 ortholog_one2one 5 retrogenes
retro_mmur_254, retro_mmur_445, retro_mmur_535, retro_mmur_654, retro_mmur_706,
Monodelphis domestica ENSMODG00000011056 ortholog_one2one 2 retrogenes
retro_mdom_1113, retro_mdom_1382,
Mus musculus ENSMUSG00000006941 ortholog_one2one 1 retrogene
retro_mmus_587,
Otolemur garnettii ENSOGAG00000025224 ortholog_one2one 1 retrogene
retro_ogar_1943,
Ictidomys tridecemlineatus ENSSTOG00000012168 ortholog_one2one 1 retrogene
retro_itri_1597,
Tupaia belangeri ENSTBEG00000013185 ortholog_one2one 6 retrogenes
retro_tbel_1861, retro_tbel_1920, retro_tbel_1996, retro_tbel_2954, retro_tbel_3209, retro_tbel_3867,
Tarsius syrichta ENSTSYG00000006338 possible_ortholog 3 retrogenes
retro_tsyr_1574, retro_tsyr_2154, retro_tsyr_888,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_154 92.04 100.00
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Download FASTA sequences of all ENSMMUG00000017704 retrocopies