Parental gene:

THUMPD3, ENSMMUG00000017307

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:51610919..51632737(-)


>ENSMMUG00000017307
ATGTGTGACATTGAAGAAGCCACTAACCAACTCCTAGATGTGAACCTTCATGAGAACCAGAGCTCTGTACAAGTGACGGA
AAGTGACCTCAGAAGTGAATCTGAGCTTCTAGTCACTATTGGAGCCACTGTACCTACTGGCTTTGAGCAAACAGCTGCAG
ATGAAGTGAGAGAGAAACTTGGGTCATCATGCAAAATCAGCAGAGACCGTGGCAAGATATATTTTGTCATTTCAGTGGAA
AGTCTGGCACAGGTTCATTGTCTTAGATCAGTTGACAACTTATTTGTGGTGGTTCAGGAATTTCAAGATTACCAATTCAA
ACAAATAAAGGAAGAAGTTCTAAAGGATTTTGAAGACTTGGCTGGAAAACTCCCATGGTCAAACCCCTTAAAAGTGTGGA
AAATTAATGCCAGTTTTAAAAAGAAAAAAGCAAAGCGCAAAAAGATAAATCAGAATTTAAGTAAAGAGAAGATTAATAAT
GGACAAGAAGTCAAAATCAATCAGAGAAATGTTAAAAAAGAGTTCACTAGCCATGCTTTAGATTCTCATATCTTAGATTA
TTATGAAAATCCAGCCATCAAAGAGGAGGTGTCAACATTAGTAGGTGATGATTTGGCATCTTCCAAAGATGAGACTGATG
AAAGCTCAAAAGAAGAAACTGAGCCTCAAGTGCTAAAGTTTAGAGTCACATGCAACAGGGCAGGAGAGAAACATTGCTTT
ACCTCAAATGAGGCTGCAAGAGATTTTGGGGGTGCTGTTCAAGATTATTTTAAGTGGAAGGCTGATATGACCAACTTTGA
TGTGGAGGTTCTTTTGAACATCCATGATAACGAAGTCATTGTGGGCATTGCATTGACTGAAGAGAGTCTCCACCGAAGAA
ATATAACACATTTTGGACCTACAACTCTTAGATCAACTCTTGCCTATGGGATGCTCAGGCTCTGTGATCCTCTACCTTAT
GATATAATAGTTGATCCGATGTGTGGAACTGGGGCAATACCAATAGAGGGGGCTACTGAATGGACTGACTGTTTTCATAT
TGCTGGTGATAATAATCCACTGGCTGTGAATAGAGCAGCAAATAACATTGCATCTTTATTGACAAGACAAATTAAAGAAA
GCAAACCATCCTGGGGCTTGCCCATAGATGCTGTTCAGTGGGATATCTGTAATCTGCCATTGAGAACTGGTTCTGTGGAT
ATTATTGTAACAGATTTGCCATTTGGAAAAAGGATGGGATCCAAGAAGAGAAACTGGAACCTTTATCCAGCTTGCCTACG
GGAGATGAGCCGTGTCTGCACACCTACCACGGGCCGAGCTGTACTACTTACTCAAGACACAAAATGCTTTACCAAGGCAT
TATCTGGAATGCGACATGTATGGCGAAAGGTGGATACGGTCTGGGTGAACGTTGGTGGTCTTCGTGCTGCAGTTTATGTA
CTGATACGTACACCTCAAGCTTTTGTTTATCCTTCAGAACAAGATGGAGAAAAAGGAACTCTTTGGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .36 RPM
SRP007412_brain 16 .81 RPM
SRP007412_cerebellum 18 .60 RPM
SRP007412_heart 15 .55 RPM
SRP007412_kidney 19 .01 RPM
SRP007412_liver 10 .41 RPM
SRP007412_testis 196 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000008538 ortholog_one2one 1 retrogene
retro_mluc_1991,
Otolemur garnettii ENSOGAG00000017111 ortholog_one2one 1 retrogene
retro_ogar_3452,
Sus scrofa ENSSSCG00000030273 ortholog_one2many 1 retrogene
retro_sscr_873,
Tupaia belangeri ENSTBEG00000003450 ortholog_one2one 7 retrogenes
retro_tbel_2328, retro_tbel_2589, retro_tbel_3717, retro_tbel_4362, retro_tbel_4489, retro_tbel_4567, retro_tbel_969,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1600 66.20 83.27
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Download FASTA sequences of all ENSMMUG00000017307 retrocopies