Parental gene:

PPP4R2, ENSMMUG00000016959

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:63153918..63224668(-)


>ENSMMUG00000016959
TGCCGGGCGCCATGTTGGAGGGTTGGTGGTAGCGGCTTGGGGAGGTGCTCGCTCTGTCGGTCTCGCTCTCTCGCACGCTT
CCCCCGGCTCCCTTCGTTCCCCCCCCCGCGCCTGCGTGCCGGAGTGTGTGCGAGGGAGGGGGAGGGCGTCGGGGGGGTGG
GGGGAGGCGTTCCGGTCCCCGAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGAG
AGGCTCCAGGAGGCGCTGAAAGATTTTGAGAAGAGGGGGAAAAAGGAAGTTTGTCCTGTCCTGGATCAGTTTCTTTGTCA
TGTAGCCAAGACTGGAGAAACAATGATTCAGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGG
ATGATTTCAGAACTTCAGCTCCTGAGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTTTGATGAAATGAAG
GAAAGAATACTGAAAATTGTCACTGGATTTAATGGTATCCCTTTTACTATTCAGCGACTATGTGAATTGTTAACGGATCC
AAGGAGAAACTATACAGGAACAGACAAATTTCTCAGAGGAGTAGAAAAGAATGTGATGGTTGTTAGCTGTGTTTATCCTT
CTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTTATGTTTCCTGGAAATTCACCAAGCTATACTGAG
AGGTCTAATATAAATGGGCCTGGGACACCTAGGCCACTTAATCGACCAAAGGTTTCTTTGTCAGCCCCCATGACAACAAA
TGGGTTGCCTGAGAGCACAGACAGCAAAGAGACAAATTTGCAGCAAAATGAAGAGAAAAATCACAGTGACTCTTCGACAT
CTGAATCACAAGTTTCCTCAGTTAGCCCTTTGAAAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAG
GTAAAAAGACTCAGGTTTGACAAAGAAAGTGAAGTCAGAGAAACAGCCAGTCAGACAACTTCCAGTGAAATTTCTTCAGT
TATGGTAGAAGAAACAGAAGCATCATCTTCATCTCAGGATAAAGACAAAGAAAGCCGTTGTACCCGGCAGCACTGTACAG
AAGAGGATGAAGAAGAGGATGAAGAGGAAGAAGAAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAAT
CAAGAAAAAGAATCTGATGATGCCTTAACTGTGAATGAAGAGACTTCTGAGGAAAATAATCAAATGGAGGAATCTGATGT
GTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTGGTGAAAACGAAGGCCCTGTAAGTTGGTTCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .01 RPM
SRP007412_brain 10 .64 RPM
SRP007412_cerebellum 10 .14 RPM
SRP007412_heart 4 .12 RPM
SRP007412_kidney 9 .39 RPM
SRP007412_liver 3 .56 RPM
SRP007412_testis 10 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007954 ortholog_one2one 3 retrogenes
retro_chof_1347, retro_chof_1914, retro_chof_2285,
Echinops telfairi ENSETEG00000019946 ortholog_one2one 2 retrogenes
retro_etel_1238, retro_etel_148,
Homo sapiens ENSG00000163605 ortholog_one2one 6 retrogenes
retro_hsap_2744, retro_hsap_2745, retro_hsap_2746, retro_hsap_2904, retro_hsap_3138, retro_hsap_3283,
Loxodonta africana ENSLAFG00000000513 ortholog_one2one 1 retrogene
retro_lafr_603,
Mus musculus ENSMUSG00000052144 ortholog_one2one 3 retrogenes
retro_mmus_1068, retro_mmus_1157, retro_mmus_3474,
Oryctolagus cuniculus ENSOCUG00000006235 ortholog_one2many 1 retrogene
retro_ocun_292,
Pan troglodytes ENSPTRG00000015108 ortholog_one2one 5 retrogenes
retro_ptro_1855, retro_ptro_1856, retro_ptro_2121, retro_ptro_2220, retro_ptro_2974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1224 89.55 59.56
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Download FASTA sequences of all ENSMMUG00000016959 retrocopies