Parental gene: | COPS6, ENSMMUG00000013440 |
| Aliases: | None |
| Description: | COP9 signalosome subunit 6 [Source:HGNC Symbol;Acc:21749] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 3:47368172..47371342(+) |
>ENSMMUG00000013440
ATGGCGGCGGCGGCGGCGGGTGCAGCTACAAACGGGACCGGAGGGAGCAGCGGGATGGAGGTGGATGCAGCAGTAGTTCC
CAGCGTGATGGCCTCCGGAGTGACTGGGAGTGTTTCCGTCGCTCTCCATCCCCTTGTCATTCTCAACATCTCCGACCACT
GGATCCGCATGCGCTCCCAGGAGGGGCGGCCTGTGCAGGTGATTGGGGCTTTGATTGGCAAGCAGGAGGGCCGAAATATC
GAGGTGATGAACTCCTTTGAGCTGCTGTCCCACACCGTGGAAGAGAAGATTATAATTGACAAGGAATATTATTACACCAA
GGAGGAGCAGTTTAAACAGGTGTTCAAGGAGCTGGAGTTTCTGGGTTGGTATACCACAGGGGGGCCACCTGACCCCTCGG
ACATCCACGTCCATAAGCAGGTGTGTGAGATCATTGAGAGCCCCCTCTTTCTGAAGTTGAACCCTATGACCAAGCACACA
GATCTTCCTGTCAGCGTTTTTGAGTCTGTCATCGATATAATCAATGGAGAGGCCACAATGCTGTTTGCTGAGCTGACCTA
CACTCTGGCCACAGAGGAAGCGGAACGCATTGGTGTAGACCACGTAGCCCGAATGACAGCAACAGGCAGTGGAGAGAACT
CCACTGTGGCTGAACACCTGATAGCACAGCACAGCGCCATCAAGATGCTGCACAGCCGCGTCAAGCTCATCTTGGAGTAC
GTCAAGGCCTCTGAAGCGGGAGAGGTCCCCTTTAATCATGAGATCCTGCGGGAGGCCTATGCTCTGTGTCACTGCCTCCC
GGTGCTCAGCACAGACAAGTTCAAGACAGATTTTTATGATCAATGCAACGACGTGGGGCTCATGGCCTACCTCGGCACCA
TCACGAAAACGTGCAACACCATGAACCAGTTTGTGAACAAGTTCAACGTCCTCTATGATCGACAAGGCATCGGCAGGCGA
ATGCGCGGGCTCTTCTTCTGA
ATGGCGGCGGCGGCGGCGGGTGCAGCTACAAACGGGACCGGAGGGAGCAGCGGGATGGAGGTGGATGCAGCAGTAGTTCC
CAGCGTGATGGCCTCCGGAGTGACTGGGAGTGTTTCCGTCGCTCTCCATCCCCTTGTCATTCTCAACATCTCCGACCACT
GGATCCGCATGCGCTCCCAGGAGGGGCGGCCTGTGCAGGTGATTGGGGCTTTGATTGGCAAGCAGGAGGGCCGAAATATC
GAGGTGATGAACTCCTTTGAGCTGCTGTCCCACACCGTGGAAGAGAAGATTATAATTGACAAGGAATATTATTACACCAA
GGAGGAGCAGTTTAAACAGGTGTTCAAGGAGCTGGAGTTTCTGGGTTGGTATACCACAGGGGGGCCACCTGACCCCTCGG
ACATCCACGTCCATAAGCAGGTGTGTGAGATCATTGAGAGCCCCCTCTTTCTGAAGTTGAACCCTATGACCAAGCACACA
GATCTTCCTGTCAGCGTTTTTGAGTCTGTCATCGATATAATCAATGGAGAGGCCACAATGCTGTTTGCTGAGCTGACCTA
CACTCTGGCCACAGAGGAAGCGGAACGCATTGGTGTAGACCACGTAGCCCGAATGACAGCAACAGGCAGTGGAGAGAACT
CCACTGTGGCTGAACACCTGATAGCACAGCACAGCGCCATCAAGATGCTGCACAGCCGCGTCAAGCTCATCTTGGAGTAC
GTCAAGGCCTCTGAAGCGGGAGAGGTCCCCTTTAATCATGAGATCCTGCGGGAGGCCTATGCTCTGTGTCACTGCCTCCC
GGTGCTCAGCACAGACAAGTTCAAGACAGATTTTTATGATCAATGCAACGACGTGGGGCTCATGGCCTACCTCGGCACCA
TCACGAAAACGTGCAACACCATGAACCAGTTTGTGAACAAGTTCAACGTCCTCTATGATCGACAAGGCATCGGCAGGCGA
ATGCGCGGGCTCTTCTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 106 .78 RPM |
| SRP007412_brain | 75 .41 RPM |
| SRP007412_cerebellum | 67 .48 RPM |
| SRP007412_heart | 55 .65 RPM |
| SRP007412_kidney | 59 .62 RPM |
| SRP007412_liver | 51 .78 RPM |
| SRP007412_testis | 140 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014814 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003561 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011125 | within_species_paralog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000015010 | within_species_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004170 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016843 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005186 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_387 | 95.11 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000013440 retrocopies