Parental gene:

PCGF3, ENSMMUG00000012624

Aliases:None
Description:polycomb group RING finger protein 3 [Source:RefSeq peptide;Acc:NP_001245100]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:3208429..3241559(-)


>ENSMMUG00000012624
TTGCAGAAGCCAAAGATGTTGACCAGGAAGATCAAGCTGTGGGACATCAACGCCCACATCACCTGCCGCCTGTGCAGTGG
GTACCTCATCGACGCCACCACGGTGACGGAGTGCCTGCACACCTTCTGCAGGAGCTGCCTGGTGAAGTACCTGGAGGAGA
ACAACACCTGCCCCACCTGCAGGATCGTGATCCACCAGAGCCACCCCCTGCAGTACATCGGTCATGACAGAACCATGCAA
GATATTGTTTACAAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGAAAGCAGAGGGAGTTCTATCACAAATTGGGCAT
GGAGGTGCCTGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCGGAATGGTGAAACCAAAG
CAGACGACAGTTCAAACAAAGAGGCCGCGGAGGAGAAGCCGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTG
AGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGGGGACTGAAGCGGAAGTGGATCCGCTGCTCCGCCCAGGCGACCGT
CTTGCATCTAAAGAAGTTCATCGCCAAAAAACTCAACCTTTCGTCCTTTAACGAGCTGGACATTTTATGCAACGAGGAGA
TCCTGGGCAAGGACCACACGCTCAAGTTCGTTGTTGTCACGAGGTGGAGATTCAAGAAGGCGCCGCTCCTGCTGCACTAC
AGACCCAAGATGGACTTGCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .77 RPM
SRP007412_brain 9 .19 RPM
SRP007412_cerebellum 6 .65 RPM
SRP007412_heart 3 .30 RPM
SRP007412_kidney 5 .16 RPM
SRP007412_liver 2 .93 RPM
SRP007412_testis 51 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001960 ortholog_one2one 1 retrogene
retro_cjac_707,
Macaca mulatta ENSMMUG00000000881 within_species_paralog 1 retrogene
retro_mmul_2591,
Monodelphis domestica ENSMODG00000005677 ortholog_one2one 3 retrogenes
retro_mdom_1481, retro_mdom_885, retro_mdom_985,
Nomascus leucogenys ENSNLEG00000000926 ortholog_one2one 1 retrogene
retro_nleu_1826,
Otolemur garnettii ENSOGAG00000015569 ortholog_one2one 1 retrogene
retro_ogar_2846,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2182 70.62 64.78
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Download FASTA sequences of all ENSMMUG00000012624 retrocopies