Parental gene:

NUP43, ENSMMUG00000009830

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:113540061..113550040(+)


>ENSMMUG00000009830
CTAGGTTCTCCCAGTTTGTATACTGACCGTGCCCACACTGGCTACCGAAGAGAATTGACTCTCTGCAGCCACCGTCTCCC
TCCTAAAGTCCCATCCAATCAGGGTTCCGCGGGAAGAGGCGGGGCTGAGAGGCGCGCGTTGTGCTTGCTTTTTGCAGTGC
CTGCTGCGGCTGCTTTCGGCATGGAGGAAATTTATGCGAAGTTTGTGTCTCAGAAAATCAGCAAAACCCGCTGGCGACCG
CTGCCTTCCGGAAGTTTGCAAACCGCGGAGACGTTTGCTACCGGATCTTGGGACAATGAGGAAAATTATGTTTCACTGTG
GTCTATTGGAGATTTTGGAAACTTGGACTCTGATGGAGGGTTTGAAGGAGACCATCAATTATTGTGTGATATCAGACACC
ATGGTGATGTCATGGATTTACAGTTTTTTGACCAGGAAAGAATTGTCACTGCTTCATCAACAGGATGTGTAACAGTTTTC
CTTCACCATCCGAATAACCAGACTCTGTCAGTCAACCAGCAGTGGACTACAGCTCACTACCACGCAGGCCCTGGCAGTCC
TTCCTATAGCAGTGCACCATGTACAGGTGTTGTGTGCAACAACCCAGAAATCGTTACAGTTGGAGAGGATGGTCGAATAA
ATCTCTTCAGAGCTGATCACAAGGAAGCTGTAAGAACCATAGGACTGGTGACCGAGTGCCACTCCACTGTGTTGATAGAC
ATCCCAACCAACAGCATGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .48 RPM
SRP007412_brain 0 .45 RPM
SRP007412_cerebellum 1 .03 RPM
SRP007412_heart 0 .18 RPM
SRP007412_kidney 0 .59 RPM
SRP007412_liver 0 .24 RPM
SRP007412_testis 1 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009426 ortholog_one2many 1 retrogene
retro_chof_1765,
Cavia porcellus ENSCPOG00000010815 ortholog_one2many 1 retrogene
retro_cpor_481,
Monodelphis domestica ENSMODG00000016808 ortholog_many2many 2 retrogenes
retro_mdom_199, retro_mdom_353,
Ictidomys tridecemlineatus ENSSTOG00000013449 ortholog_one2many 1 retrogene
retro_itri_990,
Tarsius syrichta ENSTSYG00000000944 ortholog_one2many 1 retrogene
retro_tsyr_267,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1962 72.93 73.28
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Download FASTA sequences of all ENSMMUG00000009830 retrocopies