Parental gene:

MMU.1586, ENSMMUG00000007904

Aliases:None
Description:general transcription factor IIF subunit 1 [Source:RefSeq peptide;Acc:NP_001247759]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:19:6284014..6297962(-)


>ENSMMUG00000007904
ATGGCGGCCCTAGGCCCTAGCAGCCAGAATGTCACTGAATACGTCGTTCGAGTTCCCAAGAATACAACCAAAAAATATAA
TATCATGGCTTTTAATGCAGCCGATAAAGTCAACTTTGCTACGTGGAATCAGGCTCGGCTGGAGCGGGACTTGAGCAACA
AGAAAATCTACCAAGAGGAGGAGATGCCCGAATCGGGCGCAGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGG
AGGAAGAAGTATGGCATTGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCTGG
CAGGAAGTTCAAGGGCATCAAGAAGGGAGGCGTGACAGAGAACACGTCCTACTACATCTTCACCCAGTGCCCCGACGGGG
CCTTCGAGGCCTTCCCCGTGCACAACTGGTACAATTTCACGCCACTGGCCCGGCACCGCACGCTCACTGCCGAGGAGGCC
GAGGAGGAGTGGGAGAGGAGGAACAAGGTGCTGAACCACTTCAGCATCATGCAGCAGCGGCGGCTCAAGGATCAGGACCA
GGATGAGGACGAGGAGGAGAAGGAGAAACGCGGCCGCAGGAAGGCAAGCGAGCTACGCATCCACGACCTGGAGGATGACC
TGGAGATGTCGTCTGATGCCAGTGACGCCAGCGGTGAGGAGGGCGGCAGAGCCCCCAAGGCCAAGAAGAAGGTGCCGCTG
GCCAAGGGTGGCAGGAAGAAGAAGAAGAAGAAGGGCTCTGACGACGAGGCCTTCGAGGACAGCGACGATGGGGACTTCGA
GGGCCAGGAGGTGGACTACATGTCGGATGGCTCCAGCAGCTCCCAGGACGAGCCTGAGAGCAAGGCCAAGCCGCCCCAGC
AGGAGGAGGGGCCCAAGGGTGTTGATGAGCAGAGTGACAGTAGCGAGGAGAGTGAGGAGGAGAAGCCACCCGAGGAGGAC
AAGGAGGAGGAGGAGGAGAAGAAGGCGCCCACCCCGCAGGAGAAGAAGCGCAGGAAAGACAGCAGCGAGGAGTCGGACAG
CTCAGAGGAGAGCGACATTGACAGCGAGGCCTCCTCGGCCCTCTTCATGGCGAAGAAGAAGACGCCACCCAAGAGAGAGC
GGAAGCCGTCGGGAGGGAGCTCGAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGCGGCAGCACCTCCTCCACC
CTGCGGGCGGCTGCCAGCAAGCTCGAGCAAGGGAAGCGGGTGAGTGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACGC
GGGGCCCCAGAGCCTGTCCGGGAAGTCGACCCCCCAGCCGCCATCGGGCAAGTCAACACCCAGTAGCGGCGACGTGCAGG
TGACTGAGGATGCCGTGCGCCGCTACCTGACACGGAAGCCCATGACCACTAAGGACCTGCTGAAAAAGTTCCAGACCAAG
AAGACAGGGCTGAGCAGCGAGCAGACGGTGAACGTGCTGGCCCAGATCCTCAAGCGCCTCAACCCCGAGCGCAAGATGGT
CAACGACAAAATGCACTTCTCCCTCAAGGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 98 .61 RPM
SRP007412_brain 33 .39 RPM
SRP007412_cerebellum 33 .32 RPM
SRP007412_heart 32 .33 RPM
SRP007412_kidney 26 .06 RPM
SRP007412_liver 12 .51 RPM
SRP007412_testis 80 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Sarcophilus harrisii ENSSHAG00000010846 ortholog_many2many 1 retrogene
retro_shar_55,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_689 82.17 59.57
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Download FASTA sequences of all ENSMMUG00000007904 retrocopies