Parental gene: | MMU.17930, ENSMMUG00000005494 |
| Aliases: | None |
| Description: | ribosomal protein L10 [Source:RefSeq peptide;Acc:NP_001180488] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | X:152418159..152429436(+) |
>ENSMMUG00000005494
CGGGAAAAACGGGTGCGGCCGCCTCCTGTGTCCTACAGGGGGCGCCAGACGCCTTTCCACTCGACTCGGAGTTACCGGTA
TTGTAAGAACAAGCCGTACCCAAAGTCTCGCTTCTGCCGAGGTGTCCCTGATGCCAAGATTCGCATCTTTGACCTGGGGC
GGAAGAAGGCAAAAGTGGATGAGTTTCCGCTCTGTGGCCACATGGTGTCAGATGAATATGAGCAGCTGTCCTCTGAAGCC
CTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTAAAAAGTTGTGGCAAGGATGGCTTCCATATCCGGGTGCGGCT
CCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGGGGCCGACAGGCTCCAAACGGGCATGCGAGGTG
CTTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAGTTATCATGTCCATCCGCACCAAGCTGCAGAAC
AAGGAGCATGTGATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTTCCTGGCCGCCAGAAGATCCACATCTCAAAGAAGTG
GGGCTTCACCAAATTCAATGCTGATGAATTTGAAGACATGGTGGCTGAAAAGCGGCTCATCCCAGATGGCTGTGGGGTCA
AGTACATCCCCAATCGTGGTCCTCTGGACAAATGGCGGGCCCTGCACTCATGA
CGGGAAAAACGGGTGCGGCCGCCTCCTGTGTCCTACAGGGGGCGCCAGACGCCTTTCCACTCGACTCGGAGTTACCGGTA
TTGTAAGAACAAGCCGTACCCAAAGTCTCGCTTCTGCCGAGGTGTCCCTGATGCCAAGATTCGCATCTTTGACCTGGGGC
GGAAGAAGGCAAAAGTGGATGAGTTTCCGCTCTGTGGCCACATGGTGTCAGATGAATATGAGCAGCTGTCCTCTGAAGCC
CTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTAAAAAGTTGTGGCAAGGATGGCTTCCATATCCGGGTGCGGCT
CCACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGGGGCCGACAGGCTCCAAACGGGCATGCGAGGTG
CTTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAGTTATCATGTCCATCCGCACCAAGCTGCAGAAC
AAGGAGCATGTGATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTTCCTGGCCGCCAGAAGATCCACATCTCAAAGAAGTG
GGGCTTCACCAAATTCAATGCTGATGAATTTGAAGACATGGTGGCTGAAAAGCGGCTCATCCCAGATGGCTGTGGGGTCA
AGTACATCCCCAATCGTGGTCCTCTGGACAAATGGCGGGCCCTGCACTCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 215 .70 RPM |
| SRP007412_brain | 48 .74 RPM |
| SRP007412_cerebellum | 55 .41 RPM |
| SRP007412_heart | 143 .92 RPM |
| SRP007412_kidney | 82 .16 RPM |
| SRP007412_liver | 287 .62 RPM |
| SRP007412_testis | 14 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000004369 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000001712 | ortholog_one2many | 10 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000131 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000031860 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013163 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008731 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003734 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004067 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011407 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_307 | 95.79 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_335 | 96.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_906 | 95.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1506 | 70.56 | 98.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_1654 | 98.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005494 retrocopies