Parental gene: | PDLIM7, ENSMMUG00000003146 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 6:174018654..174027213(-) |
>ENSMMUG00000003146
ATGGATTCCTTCAAGGTAGTGCTGGAGGGGCCGGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAATGTGCC
CCTCTCCATTTCCCGGCTCACTCCTGGAGGCAAAGCGGCGCAGGCCGGAGTGGCCGTCGGTGACTGGGTGCTGAGCATCG
ATGGCGAGAACGCAGGGAGCCTCACACATATCGAAGCTCAGAATAAGATCCGGGCCTGCGGGGAGCGCCTCAGCCTGGGC
CTCAGCAGGGCCCAGCCAGTTCAGAGCAAACCACAGAAGGCTGTGGCGCCTTGCAGGGCACCGCCCTGGGGAGGGCTGAG
CCCCAGACACTCAGTGCCGCCTTGTCCCCGGCTGTTCACCCCTCCCCATCTTTCTTCCTCTCCTCCACACCCTCCCCACA
GACAGCCGCTCCGACCGCTGGTCCCAGACGCCAGCAAGCAGCGGCTGATGGAGAACACAGAGGACTGGCGGCCACGGCCA
GGGACAGGCCAGTCGCGTTCCTTTCGCATCCTTGCCCACCTCACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCA
CCTGAAAAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAGCCCCAGCCTCATCTACACCCCAGGAGCCCTGGCCTGGCC
CTACCACCCCCAGCCCCACCAGCCGCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACG
AGCACAGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAACCGCACCTCCATCGTGCAGGCAGCTGC
CGGAGGGGTACCAGGAGGGGGCAGCAACAACGGCAAGACTCCTGTGTGTCACCAGTGCCACAAGGTCATCCGGGGCCGCT
ACCTGGTGGCGCTGGGCCACGCGTACCACCCCGAGGAGTTTGTTTGTAGCCAGTGTGGGAAGGTCCTAGAAGAGGGCGGC
TTCTTCGAGGAGAAGGGCGCCATCTTCTGCCCGCCATGCTATGACGTGCGCTACGCACCCAGCTGTGCCAAATGCAAGAA
GAAGATTACAGGC
ATGGATTCCTTCAAGGTAGTGCTGGAGGGGCCGGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAATGTGCC
CCTCTCCATTTCCCGGCTCACTCCTGGAGGCAAAGCGGCGCAGGCCGGAGTGGCCGTCGGTGACTGGGTGCTGAGCATCG
ATGGCGAGAACGCAGGGAGCCTCACACATATCGAAGCTCAGAATAAGATCCGGGCCTGCGGGGAGCGCCTCAGCCTGGGC
CTCAGCAGGGCCCAGCCAGTTCAGAGCAAACCACAGAAGGCTGTGGCGCCTTGCAGGGCACCGCCCTGGGGAGGGCTGAG
CCCCAGACACTCAGTGCCGCCTTGTCCCCGGCTGTTCACCCCTCCCCATCTTTCTTCCTCTCCTCCACACCCTCCCCACA
GACAGCCGCTCCGACCGCTGGTCCCAGACGCCAGCAAGCAGCGGCTGATGGAGAACACAGAGGACTGGCGGCCACGGCCA
GGGACAGGCCAGTCGCGTTCCTTTCGCATCCTTGCCCACCTCACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCA
CCTGAAAAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAGCCCCAGCCTCATCTACACCCCAGGAGCCCTGGCCTGGCC
CTACCACCCCCAGCCCCACCAGCCGCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACG
AGCACAGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAACCGCACCTCCATCGTGCAGGCAGCTGC
CGGAGGGGTACCAGGAGGGGGCAGCAACAACGGCAAGACTCCTGTGTGTCACCAGTGCCACAAGGTCATCCGGGGCCGCT
ACCTGGTGGCGCTGGGCCACGCGTACCACCCCGAGGAGTTTGTTTGTAGCCAGTGTGGGAAGGTCCTAGAAGAGGGCGGC
TTCTTCGAGGAGAAGGGCGCCATCTTCTGCCCGCCATGCTATGACGTGCGCTACGCACCCAGCTGTGCCAAATGCAAGAA
GAAGATTACAGGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .14 RPM |
| SRP007412_brain | 1 .46 RPM |
| SRP007412_cerebellum | 0 .32 RPM |
| SRP007412_heart | 20 .37 RPM |
| SRP007412_kidney | 2 .70 RPM |
| SRP007412_liver | 1 .07 RPM |
| SRP007412_testis | 5 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006678 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000196923 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004179 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007922 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2283 | 58.33 | 64.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003146 retrocopies