Parental gene:

HMGB3, ENSMICG00000015668

Aliases:None
Description:high mobility group box 3 [Source:HGNC Symbol;Acc:5004]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_151:11791..18796(+)


>ENSMICG00000015668
ATGGCTAAAGGTGACCCCAAGAAACCAAAGGGGAAGATGTCTGCTTATGCCTTCTTTGTGCAGACGTGCAGAGAAGAACA
TAAGAAGAAAAACCCAGAGGTCCCTGTCAATTTTGCAGAATTTTCCAAGAAGTGCTCTGAGAGGTGGAAGACAATGTCTG
GGAAAGAGAAGTCTAAATTTGATGAAATGGCAAAGGCGGATAAAGTCCGCTATGATCGGGAAATGAAGGATTATGGACCA
GCTAAGGGAGGAAAGAAGAAGAAGGACCCTAATGCCCCCAAAAGGCCACCGTCTGGATTCTTCCTGTTCTGTTCAGAATT
CCGCCCCAAGATCAAATCTACAAACCCTGGCATCTCTATTGGAGATGTGGCAAAAAAGCTGGGTGAGATGTGGAATAACT
TAAGTGACAGTGAAAAGCAGCCTTACATCACTAAGGCTGCCAAGCTGAAGGAGAAGTATGAGAAGNNNNNNNNNNNGTAT
AAGTCTAAAGGAAAGTTTGATGGCGCAAAGGGTCCCAATAAAATTGCCCAGAAGAAGGTGGAAGACAAAAATGAAGAGGA
GGAGAAGTACAAGGAGGATGAATAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005150 ortholog_many2many 2 retrogenes
retro_btau_190, retro_btau_38,
Canis familiaris ENSCAFG00000028715 possible_ortholog 1 retrogene
retro_cfam_1537,
Choloepus hoffmanni ENSCHOG00000005005 ortholog_one2many 2 retrogenes
retro_chof_1891, retro_chof_2010,
Cavia porcellus ENSCPOG00000000601 ortholog_one2one 2 retrogenes
retro_cpor_1432, retro_cpor_384,
Equus caballus ENSECAG00000020596 possible_ortholog 1 retrogene
retro_ecab_890,
Echinops telfairi ENSETEG00000015689 possible_ortholog 4 retrogenes
retro_etel_104, retro_etel_1272, retro_etel_385, retro_etel_465,
Felis catus ENSFCAG00000024624 possible_ortholog 4 retrogenes
retro_fcat_1480, retro_fcat_1504, retro_fcat_265, retro_fcat_865,
Loxodonta africana ENSLAFG00000025877 possible_ortholog 1 retrogene
retro_lafr_893,
Microcebus murinus ENSMICG00000000573 other_paralog 1 retrogene
retro_mmur_1529,
Microcebus murinus ENSMICG00000007144 other_paralog 7 retrogenes
retro_mmur_11, retro_mmur_1452, retro_mmur_154, retro_mmur_182, retro_mmur_40, retro_mmur_428, retro_mmur_664,
Myotis lucifugus ENSMLUG00000010926 possible_ortholog 4 retrogenes
retro_mluc_1055, retro_mluc_1989, retro_mluc_215, retro_mluc_529,
Monodelphis domestica ENSMODG00000005735 ortholog_one2many 7 retrogenes
retro_mdom_1257, retro_mdom_1508, retro_mdom_1883, retro_mdom_1952, retro_mdom_587, retro_mdom_698, retro_mdom_831,
Mustela putorius furo ENSMPUG00000011606 ortholog_many2many 2 retrogenes
retro_mputfur_138, retro_mputfur_26,
Oryctolagus cuniculus ENSOCUG00000005986 possible_ortholog 7 retrogenes
retro_ocun_1033, retro_ocun_1913, retro_ocun_1914, retro_ocun_534, retro_ocun_568, retro_ocun_891, retro_ocun_931,
Procavia capensis ENSPCAG00000001945 possible_ortholog 1 retrogene
retro_pcap_328,
Pteropus vampyrus ENSPVAG00000000219 ortholog_one2many 1 retrogene
retro_pvam_356,
Sarcophilus harrisii ENSSHAG00000002916 ortholog_one2many 2 retrogenes
retro_shar_139, retro_shar_316,
Sus scrofa ENSSSCG00000012745 ortholog_many2many 3 retrogenes
retro_sscr_1094, retro_sscr_466, retro_sscr_467,
Tupaia belangeri ENSTBEG00000003068 ortholog_one2one 18 retrogenes
retro_tbel_1002, retro_tbel_1230, retro_tbel_1579, retro_tbel_1700, retro_tbel_1819, retro_tbel_2543, retro_tbel_2730, retro_tbel_3261, retro_tbel_3476, retro_tbel_3623, retro_tbel_3781, retro_tbel_408, retro_tbel_410, retro_tbel_4203, retro_tbel_4209, retro_tbel_4299, retro_tbel_605, retro_tbel_698,
Tursiops truncatus ENSTTRG00000000205 ortholog_one2many 2 retrogenes
retro_ttru_1187, retro_ttru_372,
Vicugna pacos ENSVPAG00000000096 ortholog_one2many 2 retrogenes
retro_vpac_245, retro_vpac_434,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_60 63.71 61.86
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2. retro_mmur_564 91.33 88.66
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3. retro_mmur_853 94.41 91.75
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4. retro_mmur_994 80.70 87.63
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Download FASTA sequences of all ENSMICG00000015668 retrocopies