Parental gene:

AARSD1, ENSG00000266967

Aliases:None
Description:alanyl-tRNA synthetase domain containing 1 [Source:HGNC Symbol;Acc:28417]
Organism:Human (Homo sapiens)
Coordinates:17:41102542..41116515(-)


>ENSG00000266967
ATGGCGTTCTGGTGTCAGCGTGACAGTTATGCCCGAGAGTTCACCACCACCGTGGTCTCCTGCTGTCCCGCGGAGCTGCA
GACTGAAGGGAGCAACGGCAAGAAAGAAGTGCTGAGCGGTTTCCAAGTGGTGCTGGAAGACACAGTGCTTTTCCCTGAGG
GCGGGGGACAGCCTGATGACCGTGGTACAATCAATGACATCTCTGTGCTGAGAGTGACTCGCCGTGGGGAACAGGCTGAT
CATTTCACCCAGACACCCCTGGATCCAGGAAGCCAGGTTCTGGTCCGGGTAGATTGGGAGCGGAGGTTTGACCACATGCA
GCAGCATTCAGGGCAGCATCTCATCACGGCAGTTGCTGACCATCTATTTAAGCTGAAGACAACATCATGGGAGTTAGGGA
GATTTCGGAGTGCGATTGAGCTGGACACCCCCTCTATGACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAA
AAAATCAGAGATCGGCTGCCTGTGAATGTCCGAGAACTGAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGTGGCCGGGG
TTTGCCTGATGATCATGCTGGGCCCATTCGGGTTGTTAACATCGAGGGCGTTGATTCCAACATGTGCTGTGGGACCCATG
TGAGCAATCTCAGTGACCTTCAGGTCATTAAGATTCTGGGCACTGAGAAGGGGAAAAAGAACAGAACCAACCTGATATTT
CTGTCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAGTCATGGAACTGAAAAAGCACTGACTGCTCTGCTTAAGTGTGG
AGCAGAGGATCATGTGGAAGCAGTGAAAAAGCTCCAGAACTCCACCAAGATCCTGCAGAAGAATAACCTGAATCTGCTCA
GAGACCTGGCTGTGCACATTGCCCATAGCCTCAGGAACAGTCCAGACTGGGGAGGTGTGGTCATATTACACAGGAAGGAG
GGTGATTCAGAGTTCATGAATATCATTGCCAATGAGATTGGGTCAGAGGAGACCCTCCTGTTCTTAACTGTGGGCGATGA
GAAAGGTGGTGGACTCTTCTTACTGGCAGGGCCACCTGCGTCTGTGGAGACCCTGGGGCCCAGGGTGGCTGAGGTCCTGG
AAGGCAAAGGAGCAGGGAAGAAAGGCCGTTTTCAGGGCAAGGCCACCAAGATGAGCCGGCGGATGGAGGCGCAGGCGCTT
CTCCAGGACTACATCAGCACGCAGAGTGCTAAGGAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .59 RPM
bodymap2_lung 1 .56 RPM
bodymap2_breast 1 .85 RPM
bodymap2_adipose 1 .23 RPM
bodymap2_adrenal 9 .89 RPM
bodymap2_skeletal_muscle 0 .98 RPM
bodymap2_thyroid 3 .52 RPM
bodymap2_prostate 2 .75 RPM
bodymap2_colon 1 .66 RPM
bodymap2_testis 3 .34 RPM
bodymap2_brain 4 .36 RPM
bodymap2_heart 0 .44 RPM
bodymap2_white_blood_cells 0 .30 RPM
bodymap2_lymph_node 4 .57 RPM
bodymap2_ovary 4 .95 RPM
bodymap2_kidney 2 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000110958 within_species_paralog 5 retrogenes
retro_hsap_2084, retro_hsap_3122, retro_hsap_417, retro_hsap_618, retro_hsap_623,
Pongo abelii ENSPPYG00000029909 ortholog_one2one 3 retrogenes
retro_pabe_3654, retro_pabe_3655, retro_pabe_458,
Pan troglodytes ENSPTRG00000009230 possible_ortholog 1 retrogene
retro_ptro_3129,
Ictidomys tridecemlineatus ENSSTOG00000000481 ortholog_one2one 1 retrogene
retro_itri_940,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4707 69.96 67.96
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Download FASTA sequences of all ENSG00000266967 retrocopies