Parental gene:

CSGALNACT2, ENSG00000169826

Aliases:CSGALNACT2, CHGN2, GALNACT-2, GALNACT2
Description:chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:24292]
Organism:Human (Homo sapiens)
Coordinates:10:43633933..43680756(+)


>ENSG00000169826
ATGCCTAGAAGAGGACTGATTCTTCACACCCGGACCCACTGGTTGCTGTTGGGCCTTGCTTTGCTCTGCAGTTTGGTATT
ATTTATGTACCTCCTGGAATGTGCCCCCCAGACTGATGGAAATGCATCTCTTCCTGGTGTTGTTGGGGAAAATTATGGTA
AAGAGTATTATCAAGCCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCC
CAACTAAAACAAGAATTACAAGAAATGAGTGAGAAGATGCGGTCACTGCAAGAAAGAAGGAATGTAGGGGCTAATGGCAT
AGGCTATCAGAGCAACAAAGAGCAAGCACCTAGTGATCTTTTAGAGTTTCTTCATTCCCAAATTGACAAAGCTGAAGTTA
GCATAGGGGCCAAACTACCCAGTGAGTATGGGGTCATTCCCTTTGAAAGTTTTACCTTAATGAAAGTATTTCAATTGGAA
ATGGGTCTCACTCGCCATCCTGAAGAAAAGCCAGTTAGAAAAGACAAACGAGATGAATTGGTGGAAGTTATTGAAGCGGG
CTTGGAGGTCATTAATAATCCTGATGAAGATGATGAACAAGAAGATGAGGAGGGTCCCCTTGGAGAGAAACTGATATTTA
ATGAAAATGACTTCGTAGAAGGTTATTATCGCACTGAGAGAGATAAGGGCACACAGTATGAACTCTTTTTTAAGAAAGCA
GACCTTACGGAATATAGACATGTGACCCTCTTCCGCCCTTTTGGACCTCTCATGAAAGTGAAGAGTGAGATGATTGACAT
CACTAGATCAATTATTAATATCATTGTGCCACTTGCTGAAAGAACTGAAGCATTTGTACAATTTATGCAGAACTTCAGGG
ATGTTTGTATTCATCAAGACAAGAAGATTCATCTCACAGTGGTGTATTTTGGTAAAGAAGGACTGTCTAAAGTCAAGTCT
ATCCTAGAATCTGTCACCAGTGAGTCTAATTTTCACAATTACACCTTGGTCTCATTGAATGAAGAATTTAATCGTGGACG
AGGACTAAATGTGGGTGCCCGAGCTTGGGACAAGGGAGAGGTCTTGATGTTTTTCTGTGATGTTGATATCTATTTCTCAG
CCGAATTCCTTAACAGCTGCCGGTTAAATGCTGAGCCAGGTAAGAAGGTGTTTTACCCTGTGGTGTTCAGTCTTTACAAT
CCTGCCATTGTTTATGCCAACCAGGAAGTGCCACCACCTGTGGAGCAGCAGCTGGTTCACAAAAAGGATTCTGGCTTTTG
GCGAGATTTTGGCTTTGGAATGACTTGTCAGTATCGTTCAGATTTCCTGACCATTGGTGGATTTGACATGGAAGTGAAAG
GTTGGGGTGGAGAAGATGTTCATCTTTATCGAAAATACTTACATGGTGACCTCATTGTGATTCGGACTCCGGTTCCTGGT
CTTTTCCACCTCTGGCATGAAAAGCGCTGTGCTGATGAGCTGACCCCCGAGCAGTACCGCATGTGCATCCAGTCTAAAGC
CATGAATGAGGCCTCTCACTCCCACCTGGGAATGCTGGTCTTCAGGGAGGAAATAGAGACGCATCTTCATAAACAGGCAT
ACAGGACAAACAGTGAAGCTGTTGGTTGA

Library Parental gene expression (RPM)
bodymap2_liver 16 .16 RPM
bodymap2_lung 101 .56 RPM
bodymap2_breast 35 .93 RPM
bodymap2_adipose 53 .53 RPM
bodymap2_adrenal 38 .71 RPM
bodymap2_skeletal_muscle 20 .63 RPM
bodymap2_thyroid 31 .22 RPM
bodymap2_prostate 44 .46 RPM
bodymap2_colon 34 .61 RPM
bodymap2_testis 32 .33 RPM
bodymap2_brain 32 .53 RPM
bodymap2_heart 17 .93 RPM
bodymap2_white_blood_cells 102 .57 RPM
bodymap2_lymph_node 58 .86 RPM
bodymap2_ovary 47 .98 RPM
bodymap2_kidney 32 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Pongo abelii ENSPPYG00000002209 ortholog_one2one 1 retrogene
retro_pabe_3679,
Tupaia belangeri ENSTBEG00000012462 ortholog_one2one 2 retrogenes
retro_tbel_2719, retro_tbel_4730,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4732 90.22 58.12
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000169826 retrocopies