Parental gene:

MEMO1, ENSG00000162959

Aliases:MEMO1, C2orf4, MEMO, NS5ATP7
Description:mediator of cell motility 1 [Source:HGNC Symbol;Acc:14014]
Organism:Human (Homo sapiens)
Coordinates:2:32092877..32236299(-)


>ENSG00000162959
ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCCTCAGGACCGCAGCTGAATGCACA
GCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGCCATTATTGCCCCCCATGCAGGATATACGT
ACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGTCTATTACCCGGAGAATTTTCATCCTTGGGCCTTCT
CATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTGGATATATATAGGACACCTCTGTATGACCTTCGTATTGACCA
AAAGATTTACGGAGAACTGTGGAAGACAGGAATGTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTG
AAATGCATTTGCCTTATACAGCTAAAGCCATGGAAAGCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCT
CTGAGTGAGTCAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTC
TTCTGATTTCTGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTG
AACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCAATTACTTGAAGAAATACCAT
AATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAGAAGAATGGAATGAATATGAG
TTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAACTGGCAAGACAGTTCAGTGAGTTATGCAGCTGGAGCAC
TCACGGTCCACTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .40 RPM
bodymap2_lung 0 .44 RPM
bodymap2_breast 0 .47 RPM
bodymap2_adipose 0 .44 RPM
bodymap2_adrenal 0 .88 RPM
bodymap2_skeletal_muscle 0 .49 RPM
bodymap2_thyroid 0 .38 RPM
bodymap2_prostate 0 .28 RPM
bodymap2_colon 0 .23 RPM
bodymap2_testis 1 .45 RPM
bodymap2_brain 0 .75 RPM
bodymap2_heart 0 .39 RPM
bodymap2_white_blood_cells 0 .20 RPM
bodymap2_lymph_node 0 .27 RPM
bodymap2_ovary 0 .19 RPM
bodymap2_kidney 0 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007771 ortholog_one2one 1 retrogene
retro_amel_1500,
Equus caballus ENSECAG00000019946 ortholog_one2one 1 retrogene
retro_ecab_401,
Echinops telfairi ENSETEG00000007994 ortholog_one2one 1 retrogene
retro_etel_561,
Felis catus ENSFCAG00000001385 ortholog_one2one 1 retrogene
retro_fcat_642,
Myotis lucifugus ENSMLUG00000016108 ortholog_one2one 1 retrogene
retro_mluc_1923,
Mus musculus ENSMUSG00000058704 ortholog_one2one 1 retrogene
retro_mmus_834,
Nomascus leucogenys ENSNLEG00000015577 ortholog_one2one 1 retrogene
retro_nleu_488,
Oryctolagus cuniculus ENSOCUG00000005878 possible_ortholog 3 retrogenes
retro_ocun_1441, retro_ocun_1663, retro_ocun_928,
Otolemur garnettii ENSOGAG00000010975 ortholog_one2one 3 retrogenes
retro_ogar_1860, retro_ogar_2049, retro_ogar_3050,
Pongo abelii ENSPPYG00000012511 ortholog_one2one 1 retrogene
retro_pabe_2910,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2507 95.62 100.00
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2. retro_hsap_3522 89.66 58.25
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Download FASTA sequences of all ENSG00000162959 retrocopies