Parental gene: | C11orf48, ENSG00000162194 |
| Aliases: | None |
| Description: | chromosome 11 open reading frame 48 [Source:HGNC Symbol;Acc:28351] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:62430286..62439727(-) |
>ENSG00000162194
ATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAG
TCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGAAGGTCACCAGCACATTCAGGATTTCTCTC
AAAAGTCCCATCTGCCGTCTATTGTGGTGGAATCCAGTGAGGTGAATGAAGAGAGTGGGGATCTCCATTTGCCCCATGAG
GAGCTGCTGCTGCTCACTGATGGTGAGGAAGAGGATGCTGAGGCCTTCTTCCAAGACCAAAGTGAAGAGCCAGGCTGGGC
TTGGAGCCCACAGGACCCTAGAAGTCCTTTAAGAACATTTAACGCTGGACTCAGCTGGGGGCAGGACCAGGATGAAGAAG
ATGCTTGTTGGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGT
GTTTGTAGAAGTGGCTTTGTGGAATATTCCCATCTCCTGCCTCCTAATAGCTTTGAGGGAGCTGAAGAAGAAGCTGTTCA
AACGCCGGCGGGTGTTGAATCGGGAGCGGCGTCTGAGGCACCGGGTGGTCGGGGCTGTGATAGACCAAGGGCTGATCACG
CGGCACCACCTCAAGAAGCGGGCGTCCAGTGCACGTGCCAACATTACACTGTCAGGGAAGAAGCGCAGAAAACTCCTCCA
GCAGATCCGGCTTGCCCAGAAAGAGAAGACAGCCATGGAAGTGGAAGCCCCTTCAAAGCCAGCCAGGACTAG
ATGGCCCTTGTGCCAGGGAGAAGCAAGGAGGATGGGCTTTGGACTAGAAATAGCCCAGGCTCCTCCCAGCATCCAGAAAG
TCCCAGGCTGCCCAACCCTCTCTGGGACAGAGGAAAAATTGGCAAGGTTGAAGGTCACCAGCACATTCAGGATTTCTCTC
AAAAGTCCCATCTGCCGTCTATTGTGGTGGAATCCAGTGAGGTGAATGAAGAGAGTGGGGATCTCCATTTGCCCCATGAG
GAGCTGCTGCTGCTCACTGATGGTGAGGAAGAGGATGCTGAGGCCTTCTTCCAAGACCAAAGTGAAGAGCCAGGCTGGGC
TTGGAGCCCACAGGACCCTAGAAGTCCTTTAAGAACATTTAACGCTGGACTCAGCTGGGGGCAGGACCAGGATGAAGAAG
ATGCTTGTTGGATTCTTGAGGACACAGCATGTCTGGAAGCCACCAACCACTGTCCCTTCTGGGACTCAACAGGCTCCCGT
GTTTGTAGAAGTGGCTTTGTGGAATATTCCCATCTCCTGCCTCCTAATAGCTTTGAGGGAGCTGAAGAAGAAGCTGTTCA
AACGCCGGCGGGTGTTGAATCGGGAGCGGCGTCTGAGGCACCGGGTGGTCGGGGCTGTGATAGACCAAGGGCTGATCACG
CGGCACCACCTCAAGAAGCGGGCGTCCAGTGCACGTGCCAACATTACACTGTCAGGGAAGAAGCGCAGAAAACTCCTCCA
GCAGATCCGGCTTGCCCAGAAAGAGAAGACAGCCATGGAAGTGGAAGCCCCTTCAAAGCCAGCCAGGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 13 .75 RPM |
| bodymap2_lung | 13 .45 RPM |
| bodymap2_breast | 11 .48 RPM |
| bodymap2_adipose | 12 .98 RPM |
| bodymap2_adrenal | 23 .15 RPM |
| bodymap2_skeletal_muscle | 9 .44 RPM |
| bodymap2_thyroid | 15 .59 RPM |
| bodymap2_prostate | 14 .15 RPM |
| bodymap2_colon | 13 .01 RPM |
| bodymap2_testis | 23 .89 RPM |
| bodymap2_brain | 14 .42 RPM |
| bodymap2_heart | 5 .83 RPM |
| bodymap2_white_blood_cells | 15 .75 RPM |
| bodymap2_lymph_node | 18 .66 RPM |
| bodymap2_ovary | 20 .47 RPM |
| bodymap2_kidney | 17 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000004026 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2760 | 70.91 | 89.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3681 | 80.65 | 99.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4139 | 75.65 | 92.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000162194 retrocopies