Parental gene:

PGD, ENSG00000142657

Aliases:PGD, 6PGD
Description:phosphogluconate dehydrogenase [Source:HGNC Symbol;Acc:8891]
Organism:Human (Homo sapiens)
Coordinates:1:10458648..10480201(+)


>ENSG00000142657
ATGGCCCAAGCTGACATCGCGCTGATCGGATTGGCCGTCATGGGCCAGAACTTAATTCTGAACATGAATGACCACGGCTT
TGTGGTCTGTGCTTTTAATAGGACTGTCTCCAAAGTTGATGATTTCTTGGCCAATGAGGCAAAGGGAACCAAAGTGGTGG
GTGCCCAGTCCCTGAAAGAGATGGTCTCCAAGCTGAAGAAGCCCCGGCGGATCATCCTCCTGGTGAAGGCTGGGCAAGCT
GTGGATGATTTCATCGAGAAATTGGTACCATTGTTGGATACTGGTGACATCATCATTGACGGAGGAAATTCTGAATATAG
GGACACCACAAGACGGTGCCGAGACCTCAAGGCCAAGGGAATTTTATTTGTGGGGAGCGGAGTCAGTGGTGGAGAGGAAG
GGGCCCGGTATGGCCCATCGCTCATGCCAGGAGGGAACAAAGAAGCGTGGCCCCACATCAAGACCATCTTCCAAGGCATT
GCTGCAAAAGTGGGAACTGGAGAACCCTGCTGTGACTGGGTGGGAGATGAGGGAGCAGGCCACTTCGTGAAGATGGTGCA
CAACGGGATAGAGTATGGGGACATGCAGCTGATCTGTGAGGCATACCACCTGATGAAAGACGTGCTGGGCATGGCGCAGG
ACGAGATGGCCCAGGCCTTTGAGGATTGGAATAAGACAGAGCTAGACTCATTCCTGATTGAAATCACAGCCAATATTCTC
AAGTTCCAAGACACCGATGGCAAACACCTGCTGCCAAAGATCAGGGACAGCGCGGGGCAGAAGGGCACAGGGAAGTGGAC
CGCCATCTCCGCCCTGGAATACGGCGTACCCGTCACCCTCATTGGAGAAGCTGTCTTTGCTCGGTGCTTATCATCTCTGA
AGGATGAGAGAATTCAAGCTAGCAAAAAGCTGAAGGGTCCCCAGAAGTTCCAGTTTGATGGTGATAAGAAATCATTCCTG
GAGGACATTCGGAAGGCACTCTACGCTTCCAAGATCATCTCTTACGCTCAAGGCTTTATGCTGCTAAGGCAGGCAGCCAC
CGAGTTTGGCTGGACTCTCAATTATGGTGGCATCGCCCTGATGTGGAGAGGGGGCTGCATCATTAGAAGTGTATTCCTAG
GAAAGATAAAGGATGCATTTGATCGAAACCCGGAACTTCAGAACCTCCTACTGGACGACTTCTTTAAGTCAGCTGTTGAA
AACTGCCAGGACTCCTGGCGGCGGGCAGTCAGCACTGGGGTCCAGGCTGGCATTCCCATGCCCTGTTTTACCACTGCCCT
CTCCTTCTATGACGGGTACAGACATGAGATGCTTCCAGCCAGCCTCATCCAGGCTCAGCGGGATTACTTCGGGGCTCACA
CCTATGAACTCTTGGCCAAACCAGGGCAGTTTATCCACACCAACTGGACAGGCCATGGTGGCACCGTGTCATCCTCGTCA
TACAATGCCTGA

Library Parental gene expression (RPM)
bodymap2_liver 65 .06 RPM
bodymap2_lung 80 .38 RPM
bodymap2_breast 246 .58 RPM
bodymap2_adipose 275 .55 RPM
bodymap2_adrenal 50 .93 RPM
bodymap2_skeletal_muscle 27 .26 RPM
bodymap2_thyroid 96 .40 RPM
bodymap2_prostate 35 .45 RPM
bodymap2_colon 25 .95 RPM
bodymap2_testis 105 .52 RPM
bodymap2_brain 58 .53 RPM
bodymap2_heart 20 .25 RPM
bodymap2_white_blood_cells 277 .89 RPM
bodymap2_lymph_node 72 .44 RPM
bodymap2_ovary 77 .32 RPM
bodymap2_kidney 80 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005090 ortholog_one2one 2 retrogenes
retro_cjac_1405, retro_cjac_2892,
Gorilla gorilla ENSGGOG00000004754 ortholog_one2one 2 retrogenes
retro_ggor_1374, retro_ggor_811,
Macaca mulatta ENSMMUG00000023029 ortholog_one2one 1 retrogene
retro_mmul_1328,
Otolemur garnettii ENSOGAG00000011164 ortholog_one2one 1 retrogene
retro_ogar_3372,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1877 91.19 67.23
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Download FASTA sequences of all ENSG00000142657 retrocopies