Parental gene:

E2F3, ENSG00000112242

Aliases:E2F3, E2F-3
Description:E2F transcription factor 3 [Source:HGNC Symbol;Acc:3115]
Organism:Human (Homo sapiens)
Coordinates:6:20402397..20493941(+)


>ENSG00000112242
ATGAGAAAGGGAATCCAGCCCGCTCTGGAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTGTCGTCGCCGC
CGCCGCTGCAGCCTCCATGGACAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCC
CGGGCGCGTACATCCAGATCCTCACCACGAACACTTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCC
GCCGGCCCCCTCCTCCCCAGTGCCCCCGGCGCGGAGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTC
CAGCAGAGCCGGGCTGCTGCAGCAGCCACCAGCGCTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAAAGC
GAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGAAGAGCTGCA
CTACGAAGTCCAGATAGTCCAAAAACTCCAAAATCTCCCTCAGAAAAAACGCGGTATGATACGTCTCTTGGTCTGCTCAC
CAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGGCAGCAGAAGTGCTAAAAGTGC
AAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATTAAGAAGAAGTCTAAAAACAACGTCCAA
TGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTGTCAAGGCCTGTCAAAAGAAGTGACCGAGCTCAG
TCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCACCCTGGACCTCAAACTGTTAACCGAGGATTCAGAGAATC
AAAGGTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAGACCAAACTGTTATAGTTGTGAAAGCC
CCTCCAGAAACAAGACTTGAAGTGCCTGACTCAATAGAGAGCCTACAAATACATTTGGCAAGTACCCAAGGGCCCATTGA
GGTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCAAGACCACAATGGGAATATCCCTA
AACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCTCAGTTTCTATGGGAAACCTTTCTCCTCTG
GCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCTTCCAACCTAGAAGGACCGTTTGTGAACTTACTGCC
TCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGAGGAGGAAGGCATCAGCGATCTCTTCGATGCTTACGATTTGG
AAAAGCTCCCACTGGTGGAAGACTTCATGTGTAGTTGA

Library Parental gene expression (RPM)
bodymap2_liver 5 .39 RPM
bodymap2_lung 13 .54 RPM
bodymap2_breast 12 .96 RPM
bodymap2_adipose 17 .49 RPM
bodymap2_adrenal 23 .09 RPM
bodymap2_skeletal_muscle 6 .24 RPM
bodymap2_thyroid 23 .88 RPM
bodymap2_prostate 8 .21 RPM
bodymap2_colon 9 .32 RPM
bodymap2_testis 10 .05 RPM
bodymap2_brain 15 .19 RPM
bodymap2_heart 13 .00 RPM
bodymap2_white_blood_cells 74 .97 RPM
bodymap2_lymph_node 25 .80 RPM
bodymap2_ovary 6 .79 RPM
bodymap2_kidney 25 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021045 ortholog_one2one 1 retrogene
retro_btau_1523,
Choloepus hoffmanni ENSCHOG00000008679 ortholog_one2one 2 retrogenes
retro_chof_416, retro_chof_871,
Homo sapiens ENSG00000169016 within_species_paralog 4 retrogenes
retro_hsap_2542, retro_hsap_2547, retro_hsap_2572, retro_hsap_4906,
Gorilla gorilla ENSGGOG00000011022 ortholog_one2one 2 retrogenes
retro_ggor_1796, retro_ggor_2254,
Macaca mulatta ENSMMUG00000017649 ortholog_one2one 1 retrogene
retro_mmul_955,
Pongo abelii ENSPPYG00000016269 ortholog_one2one 2 retrogenes
retro_pabe_1447, retro_pabe_2137,
Pan troglodytes ENSPTRG00000023584 ortholog_one2one 2 retrogenes
retro_ptro_1217, retro_ptro_1731,
Tupaia belangeri ENSTBEG00000000171 ortholog_one2one 1 retrogene
retro_tbel_4457,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1749 86.89 64.95
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Download FASTA sequences of all ENSG00000112242 retrocopies