Parental gene:

SRSF9, ENSG00000111786

Aliases:SRSF9, SFRS9, SRp30c
Description:serine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:10791]
Organism:Human (Homo sapiens)
Coordinates:12:120899470..120907596(-)


>ENSG00000111786
ATGTCGGGCTGGGCGGACGAGCGCGGCGGCGAGGGCGACGGGCGCATCTACGTGGGGAACCTTCCGACCGACGTGCGCGA
GAAGGACTTGGAGGACCTGTTCTACAAGTACGGCCGCATCCGCGAGATCGAGCTCAAGAACCGGCACGGCCTCGTGCCCT
TCGCCTTCGTGCGCTTCGAGGACCCCCGAGATGCAGAGGATGCTATTTATGGAAGAAATGGTTATGATTATGGCCAGTGT
CGGCTTCGTGTGGAGTTCCCCAGGACTTATGGAGGTCGGGGTGGGTGGCCCCGTGGTGGGAGGAATGGGCCTCCTACAAG
AAGATCTGATTTCCGAGTTCTTGTTTCAGGACTTCCTCCGTCAGGCAGCTGGCAGGACCTGAAGGATCACATGCGAGAAG
CTGGGGATGTCTGTTATGCTGATGTGCAGAAGGATGGAGTGGGGATGGTCGAGTATCTCAGAAAAGAAGACATGGAATAT
GCCCTGCGTAAACTGGATGACACCAAATTCCGCTCTCATGAGGGTGAAACTTCCTACATCCGAGTTTATCCTGAGAGAAG
CACCAGCTATGGCTACTCACGGTCTCGGTCTGGGTCAAGGGGCCGTGACTCTCCATACCAAAGCAGGGGTTCCCCACACT
ACTTCTCTCCTTTCAGGCCCTACTGA

Library Parental gene expression (RPM)
bodymap2_liver 61 .45 RPM
bodymap2_lung 96 .13 RPM
bodymap2_breast 74 .61 RPM
bodymap2_adipose 79 .99 RPM
bodymap2_adrenal 104 .93 RPM
bodymap2_skeletal_muscle 23 .66 RPM
bodymap2_thyroid 105 .96 RPM
bodymap2_prostate 89 .48 RPM
bodymap2_colon 92 .95 RPM
bodymap2_testis 105 .14 RPM
bodymap2_brain 70 .27 RPM
bodymap2_heart 25 .40 RPM
bodymap2_white_blood_cells 102 .16 RPM
bodymap2_lymph_node 116 .46 RPM
bodymap2_ovary 106 .37 RPM
bodymap2_kidney 102 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012792 ortholog_one2one 1 retrogene
retro_btau_837,
Choloepus hoffmanni ENSCHOG00000009241 ortholog_one2one 1 retrogene
retro_chof_1119,
Callithrix jacchus ENSCJAG00000001187 ortholog_one2one 1 retrogene
retro_cjac_442,
Dasypus novemcinctus ENSDNOG00000012598 ortholog_one2one 2 retrogenes
retro_dnov_1555, retro_dnov_2648,
Homo sapiens ENSG00000112081 other_paralog 4 retrogenes
retro_hsap_2140, retro_hsap_2299, retro_hsap_2304, retro_hsap_757,
Homo sapiens ENSG00000124193 within_species_paralog 1 retrogene
retro_hsap_1809,
Macaca mulatta ENSMMUG00000016494 ortholog_one2one 1 retrogene
retro_mmul_2154,
Nomascus leucogenys ENSNLEG00000015661 ortholog_one2one 1 retrogene
retro_nleu_1931,
Otolemur garnettii ENSOGAG00000003852 ortholog_one2one 1 retrogene
retro_ogar_2328,
Ochotona princeps ENSOPRG00000004234 ortholog_one2one 1 retrogene
retro_opri_878,
Pongo abelii ENSPPYG00000005031 ortholog_one2many 1 retrogene
retro_pabe_119,
Sarcophilus harrisii ENSSHAG00000005685 ortholog_one2one 1 retrogene
retro_shar_598,
Sus scrofa ENSSSCG00000009906 ortholog_one2one 1 retrogene
retro_sscr_745,
Tupaia belangeri ENSTBEG00000008499 ortholog_one2one 1 retrogene
retro_tbel_2602,
Tarsius syrichta ENSTSYG00000006848 ortholog_one2one 4 retrogenes
retro_tsyr_1432, retro_tsyr_1648, retro_tsyr_585, retro_tsyr_891,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2530 84.55 99.09
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Download FASTA sequences of all ENSG00000111786 retrocopies