Parental gene: | CDC42, ENSG00000070831 |
| Aliases: | CDC42, CDC42Hs, G25K |
| Description: | cell division cycle 42 [Source:HGNC Symbol;Acc:1736] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:22379119..22419437(+) |
>ENSG00000070831
ATGCAGACAATTAAGTGTGTTGTTGTGGGCGATGGTGCTGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA
ATTTCCATCGGAATATGTACCGACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAACCATATACTCTTG
GACTTTTTGATACTGCAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTC
TGTTTTTCAGTGGTCTCTCCATCTTCATTTGAAAACGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCACTGTCCAAA
GACTCCTTTCTTGCTTGTTGGGACTCAAATTGATCTCAGAGATGACCCCTCTACTATTGAGAAACTTGCCAAGAACAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTT
ACACAGAAAGGCCTAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCAGAACCGAAGAAGAGCCGCAG
GTGTGTGCTGCTATGA
ATGCAGACAATTAAGTGTGTTGTTGTGGGCGATGGTGCTGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA
ATTTCCATCGGAATATGTACCGACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAACCATATACTCTTG
GACTTTTTGATACTGCAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTC
TGTTTTTCAGTGGTCTCTCCATCTTCATTTGAAAACGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCACTGTCCAAA
GACTCCTTTCTTGCTTGTTGGGACTCAAATTGATCTCAGAGATGACCCCTCTACTATTGAGAAACTTGCCAAGAACAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTT
ACACAGAAAGGCCTAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCAGAACCGAAGAAGAGCCGCAG
GTGTGTGCTGCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 90 .92 RPM |
| bodymap2_lung | 331 .80 RPM |
| bodymap2_breast | 331 .19 RPM |
| bodymap2_adipose | 397 .02 RPM |
| bodymap2_adrenal | 299 .65 RPM |
| bodymap2_skeletal_muscle | 105 .94 RPM |
| bodymap2_thyroid | 229 .89 RPM |
| bodymap2_prostate | 218 .41 RPM |
| bodymap2_colon | 227 .18 RPM |
| bodymap2_testis | 229 .71 RPM |
| bodymap2_brain | 209 .16 RPM |
| bodymap2_heart | 123 .43 RPM |
| bodymap2_white_blood_cells | 576 .79 RPM |
| bodymap2_lymph_node | 187 .27 RPM |
| bodymap2_ovary | 321 .54 RPM |
| bodymap2_kidney | 207 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014707 | ortholog_one2many | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005306 | possible_ortholog | 10 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005912 | possible_ortholog | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000006543 | possible_ortholog | 4 retrogenes | |
| Equus caballus | ENSECAG00000019180 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000004853 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000119729 | within_species_paralog | 3 retrogenes | |
| Homo sapiens | ENSG00000136238 | other_paralog | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013365 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000016078 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015999 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009986 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014261 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000005184 | possible_ortholog | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000003520 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2775 | 75.61 | 62.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2968 | 70.09 | 61.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3028 | 98.43 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3404 | 84.48 | 89.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3848 | 84.66 | 98.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_4013 | 87.96 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000070831 retrocopies