Parental gene:

SNX3, ENSFCAG00000024997

Aliases:None
Description:sorting nexin 3 [Source:HGNC Symbol;Acc:11174]
Organism:Cat (Felis catus)
Coordinates:B2:99775469..99819856(-)


>ENSFCAG00000024997
CGAGCCCAGGTCGCGGCGTCCCGGAGACGGCTGATCACCAAGCCCCAGAACCTTAATGATGCCTACGGGCCGCCCAGCAA
CTTCCTCGAGATCGATGTGAGCAACCCGCAGACGGTGGGGGTCGGCCGGGGCCGCTTCACCACCTACGAAATCAGGGTCA
AGACAAATCTGCCTATTTTCAAGCTGAAGGAATCTACTGTTAGAAGAAGATACAGTGACTTTGAGTGGCTGCGAAGTGAA
TTAGAAAGAGAGAGCAAGGTTGTAGTTCCCCCGCTCCCTGGAAAAGCATTTTTGCGTCAGCTTCCTTTCAGAGGAGATGA
TGGAATATTTGATGATAATTTTATTGAAGAAAGGAAGCAAGGGCTGGAGCAGTTTATAAACAAGGTCGCTGGTCATCCTC
TGGCACAGAATGAACGTTGTCTTCACATGTTTTTACAGGACGAAATTATAGATAAAAGCTATACTCCATCTAAAATAAGA
CATGCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 23 .15 RPM
SRP017611_kidney 37 .10 RPM
SRP017611_brain 42 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000015256 ortholog_one2one 1 retrogene
retro_eeur_525,
Echinops telfairi ENSETEG00000003537 ortholog_one2one 3 retrogenes
retro_etel_1331, retro_etel_645, retro_etel_924,
Loxodonta africana ENSLAFG00000018131 ortholog_one2one 1 retrogene
retro_lafr_579,
Oryctolagus cuniculus ENSOCUG00000005858 ortholog_one2one 2 retrogenes
retro_ocun_1022, retro_ocun_750,
Tupaia belangeri ENSTBEG00000011755 ortholog_one2one 3 retrogenes
retro_tbel_2964, retro_tbel_3503, retro_tbel_3929,
Tursiops truncatus ENSTTRG00000008868 ortholog_one2one 2 retrogenes
retro_ttru_1028, retro_ttru_1103,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1705 88.27 99.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000024997 retrocopies