Parental gene:

ENSFCAG00000003925

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:F1:63811348..63852070(+)


>ENSFCAG00000003925
ATGTCCAGCAAAGGGAACGGCGCAGAAGGCAAAACAGACTTAGCCAACGGAAGCCTGTCTAGCAGTCCAGAGGAGATGTC
TGGCGCTGAGGAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAAGCCTCAGACCTGAGCTTGAGCTTGACTGGGGATG
ATGGTGGCCCCAACCGTGCCAGCACAGGAAGCCGGGGTACAGATACGGAGAGCTCAGGTGAAGACAAGGACTCTGACAGC
ATGGAAGACACTGGCCATTACTCCATCAACGACGAAAACCAAGTCCATGACCGCTCAGAGGAAGAAGAGGAAGAAGAGGA
GGAGGAGGAGGAAGCGCACCCTCGGCGCCGTGTCCAGCGGAAGCGGGCCAACCGTGACCAGGACTCATCAGATGATGAGC
GGGCCCTGGAGGACTGGGTGTCTTCGGAGACATCCGCCCTGCCTCGACCTCGGTGGCAAGCCCTTCCTGCCCTTCGGGAG
CGGGAGCTGGGTTCTAGCGCCCGCTTTGTCTATGAGGCTTGCGGAGCAAGAGTCTTTGTGCAGCGTTTCCGCCTGCAGCA
TGGGCTCGAGGGCCATACTGGTTGTGTCAACACCCTGCACTTTAACCAGCGCGGCACCTGGCTGGCCAGTGGCAGCGATG
ACCTGAAAGTGGTGGTTTGGGACTGGGTGCGGCGGCAGCCAGTGCTGGACTTTGAGAGCGGCCACAAAAGCAATGTCTTC
CAGGCCAAGTTCCTTCCTAACAGCGGTGACTCCACCCTGGCCATGTGTGCCCGTGACGGGCAGGTGCGGGTAGCAGAGCT
GTCTGCCACACAGTGTTGCAAGAACACGAAGCGTGTGGCCCAGCACAAGGGAGCGTCCCACAAGTTGGCCCTGGAACCGG
ACTCTCCCTGTACGTTCCTGTCTGCAGGTGAAGACGCCGTTGTTTTCACCATTGACCTCAGACAAGACCGGCCAGCTTCG
AAACTGGTGGTGACAAAAGAGAAGGAGAAGAAAGTGGGGCTCTATACGATCTATGTGAATCCTGCCAATACCCACCAGTT
TGCAGTGGGTGGACGAGATCAGTTTGTAAGGATTTACGACCAGAGGAAAATTGATGAGAATGAGAACAACGGAGTGCTCA
AGAAGTTCTGTCCTCACCACCTGGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTTCAGCCACGACGGCACA
GAGCTCCTGGCCAGTTACAACGACGAAGACATTTACCTCTTCAACTCCTCTCACAGCGACGGGGCCCAGTATGTGAAGAG
ATACAAGGGCCACAGAAATAATGCCACAGTAAAAGGCGTCAATTTCTATGGCCCCAAGAGCGAGTTTGTGGTGAGCGGCA
GCGACTGCGGGCACATCTTCCTCTGGGAGAAGTCCTCCTGCCAGATCGTGCAGTTCATGGAGGGGGACAAGGGAGGCGTG
GTAAACTGTCTTGAGCCCCACCCTCACCTGCCTGTGCTGGCAACCAGCGGCCTAGACCATGATGTCAAGATCTGGGCACC
CACCGCTGAAACTTCCACTGAGCTGACGGGGCTGAAGGATGTGATTAAGAAGAACAAGCGGGAGCGGGATGAAGACAGCT
TGCACCACACCGACCTGTTTGACAGCCACATGCTCTGGTTCCTCATGCATCACCTGAGACAGAGACGCCACCACCGGCGC
TGGCGAGAGCCTGGGGTCGGGGCCACAGATGCAGACTCGGATGAGTCCCCCAGCTCCTCAGACACATCGGACGAGGAGGA
GGGCCCCGACCGGGTGCAGTGCATGCCTTCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 40 .84 RPM
SRP017611_kidney 66 .78 RPM
SRP017611_brain 79 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014293 ortholog_one2one 1 retrogene
retro_amel_47,
Bos taurus ENSBTAG00000005796 ortholog_one2one 1 retrogene
retro_btau_1853,
Canis familiaris ENSCAFG00000031010 ortholog_one2one 1 retrogene
retro_cfam_223,
Callithrix jacchus ENSCJAG00000005913 ortholog_one2one 1 retrogene
retro_cjac_1322,
Echinops telfairi ENSETEG00000012876 ortholog_one2one 1 retrogene
retro_etel_654,
Mustela putorius furo ENSMPUG00000013949 ortholog_one2one 1 retrogene
retro_mputfur_173,
Mus musculus ENSMUSG00000026554 possible_ortholog 1 retrogene
retro_mmus_111,
Otolemur garnettii ENSOGAG00000011349 ortholog_one2one 1 retrogene
retro_ogar_2113,
Pteropus vampyrus ENSPVAG00000007982 ortholog_one2one 1 retrogene
retro_pvam_1356,
Sus scrofa ENSSSCG00000006388 ortholog_one2one 1 retrogene
retro_sscr_88,
Tupaia belangeri ENSTBEG00000001566 ortholog_one2one 1 retrogene
retro_tbel_3644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_14 70.03 95.64
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Download FASTA sequences of all ENSFCAG00000003925 retrocopies