Parental gene: | DDX18, ENSETEG00000017166 |
| Aliases: | None |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_1030:51270..100848(+) |
>ENSETEG00000017166
ATGTCTCACCTGCCGATGAAACTCCTGCGCAAGAAGATCGAGAAGCGGAATCAGAAATTGCGGCAACGAAACCTGAAGCT
ACAGGGGGCAGCAGGTGTGAGCACATCAGAAGGGCAGAATGGAGATGTGCCTCAACCAACAGTGGGAGATGAAAACGAGA
GAAAATCCTTAAAACCGTCTATGAAGATGGGCTTCTCAGGACCCCAAAATGGAAATGTGTCTAAAGAAACGGTGGACAAT
GTAAAAATTAAAAACTCCCCCAAGAAACCTGCTGTTTTATCCAATGGAGAAGCAGCAACACAAGCTCCTAATTCAAAATT
GAAAAAGAAGAAGAAGAAAAGGAAAATGGAGGATGCTGCCAGGCCTGATATAAAAAAGGCAAAAACTGAAGACACCGAGG
AGTCTAAAAAGTGTGACATCCAGACTCCGGCAGAAGCGGAAACAAGAATGGAACAGCCAGATGGTGACGAAGAGGATAAT
GAATTGCCCAGCCTGCCCCTGGGACTGACGGGTGCTTTTGAAGATACTTCATTTACTTCACTGGCTAATCTTGTCAATGA
AAACACTCTGAAGTCCATTAAAGAAATGGGCTTTACAAATATGACTGAAATTCAGCATAAAAGTATCCGACCACTTCTGG
AAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGCAGTTGAACTCATT
GTTAAGTTAAAATTCATGCCCAGGAACGGAACAGGAGTTCTTATTCTCTCCCCCACTAGGGAACTGGCCATGCAGACGTT
TGGTGTGCTGAAGGAGCTAATGACACACCATGTTCACACGTATGGGCTGATCATGGGGGGTAGTAACAGATCTGCGGAAG
CACAGAAACTTGCTAACGGGATCAACATCATTGTAGCTACACCAGGCCGCCTCCTGGACCATATGCAGAATACTCCAGGG
TTTATGTATAAAAACCTACAGTGCCTGGTCATTGATGAAGCTGATCGTATCTTGGATGTTGGATTTGAAGAGGAGTTAAA
GCAGATTATTAAACTTCTGCCAGTACGCAGACAGACCATGCTTTTTTCTGCCACTCAAACGCGAAAGGTGGACGACCTGG
CGAGGATTTCTCTGAAAAAGGAGCCTTTGTATGTCGGCGTGGATGGTGAGGGATCGAATTCAGAGAGCGGGGTGGTTGGA
TTGGAAAATGGCTACGTTGTCTGTCCCTCTGAAAAAAGATTCCTTCTGCTGTTTACCTTCCTGAAGAAGAACCGAAAGAA
GAAACTGATGGTGTTCTTTTCGTCCTGCATGTCTGTCAAATACCACTATGAGTTGCTGAACTACATTGACTTGCCTGTCT
TGGCCATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCCACTAAATGAATTTGAGTTTTCCTGGTCCAAAATCTCC
GATATTCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTGAACAGCAATGAAGGCAAACATAGAAAGCGAGGAGGAGGTGGT
GGATTCGGCTACCAGAAAACCAAAAGGGTCGAAAAGTCCAAGATCTTCAAGAATATTAGCAAGAAATCGTCTGACAGCAG
GCAGTTCTCCCACTGA
ATGTCTCACCTGCCGATGAAACTCCTGCGCAAGAAGATCGAGAAGCGGAATCAGAAATTGCGGCAACGAAACCTGAAGCT
ACAGGGGGCAGCAGGTGTGAGCACATCAGAAGGGCAGAATGGAGATGTGCCTCAACCAACAGTGGGAGATGAAAACGAGA
GAAAATCCTTAAAACCGTCTATGAAGATGGGCTTCTCAGGACCCCAAAATGGAAATGTGTCTAAAGAAACGGTGGACAAT
GTAAAAATTAAAAACTCCCCCAAGAAACCTGCTGTTTTATCCAATGGAGAAGCAGCAACACAAGCTCCTAATTCAAAATT
GAAAAAGAAGAAGAAGAAAAGGAAAATGGAGGATGCTGCCAGGCCTGATATAAAAAAGGCAAAAACTGAAGACACCGAGG
AGTCTAAAAAGTGTGACATCCAGACTCCGGCAGAAGCGGAAACAAGAATGGAACAGCCAGATGGTGACGAAGAGGATAAT
GAATTGCCCAGCCTGCCCCTGGGACTGACGGGTGCTTTTGAAGATACTTCATTTACTTCACTGGCTAATCTTGTCAATGA
AAACACTCTGAAGTCCATTAAAGAAATGGGCTTTACAAATATGACTGAAATTCAGCATAAAAGTATCCGACCACTTCTGG
AAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGCAGTTGAACTCATT
GTTAAGTTAAAATTCATGCCCAGGAACGGAACAGGAGTTCTTATTCTCTCCCCCACTAGGGAACTGGCCATGCAGACGTT
TGGTGTGCTGAAGGAGCTAATGACACACCATGTTCACACGTATGGGCTGATCATGGGGGGTAGTAACAGATCTGCGGAAG
CACAGAAACTTGCTAACGGGATCAACATCATTGTAGCTACACCAGGCCGCCTCCTGGACCATATGCAGAATACTCCAGGG
TTTATGTATAAAAACCTACAGTGCCTGGTCATTGATGAAGCTGATCGTATCTTGGATGTTGGATTTGAAGAGGAGTTAAA
GCAGATTATTAAACTTCTGCCAGTACGCAGACAGACCATGCTTTTTTCTGCCACTCAAACGCGAAAGGTGGACGACCTGG
CGAGGATTTCTCTGAAAAAGGAGCCTTTGTATGTCGGCGTGGATGGTGAGGGATCGAATTCAGAGAGCGGGGTGGTTGGA
TTGGAAAATGGCTACGTTGTCTGTCCCTCTGAAAAAAGATTCCTTCTGCTGTTTACCTTCCTGAAGAAGAACCGAAAGAA
GAAACTGATGGTGTTCTTTTCGTCCTGCATGTCTGTCAAATACCACTATGAGTTGCTGAACTACATTGACTTGCCTGTCT
TGGCCATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCCACTAAATGAATTTGAGTTTTCCTGGTCCAAAATCTCC
GATATTCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTGAACAGCAATGAAGGCAAACATAGAAAGCGAGGAGGAGGTGGT
GGATTCGGCTACCAGAAAACCAAAAGGGTCGAAAAGTCCAAGATCTTCAAGAATATTAGCAAGAAATCGTCTGACAGCAG
GCAGTTCTCCCACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021414 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000088205 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028420 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000017590 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017607 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021343 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000533 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011769 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000012796 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000012391 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_297 | 87.12 | 68.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1919 | 89.72 | 68.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000017166 retrocopies