Parental gene:

CNN2, ENSEEUG00000015171

Aliases:None
Description:calponin 2 [Source:HGNC Symbol;Acc:2156]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_336262:3999..4790(-)


>ENSEEUG00000015171
GCCAAGACCAAGGGGCTGCACACGGGCATGGACATCGGGGTCAAGTACTCGGAAAAGCAGCAACGCAACTTTGACGATGC
CACCATGAAGGCCGGCCAGTGTGTCATTGGGCTCCAGATGGGCACCAACAAGTGTGCCAGTCAGTCGGGCATGACGGCCT
ACGGCACCCGGCGGCACCTATATGATCCCAAGAACCACATCCTGCCCCCCATGGACCACTCCACCATCAGCCTACAGATG
GGCACCAACAAGTGTGCCAGCCAGGTGGGCATGACGGCCCCGGGGACCCGGCGGCACATCTACGACACCAAGCTGGGCAC
AGACAAGTGCGACAACTCGTCCATGTCCCTGCAGATGGGCTTTGCACAGGGCGCCACCCAGAGCGGCCAGGTGTTCGGGC
TGGGCCGCCAGATCTACGACCCCAAATACTGCCCACAGGGCCCCGCAGGTGGGGGGGGCGGGGGCGGCGGGGAGGCCCAG
GATGGACCCCCCTACTGCCAGGAGGAGGCCGGATACTGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .45 RPM
SRP017611_kidney 3 .94 RPM
SRP017611_brain 0 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000001141 ortholog_one2one 1 retrogene
retro_dord_672,
Gorilla gorilla ENSGGOG00000028153 possible_ortholog 9 retrogenes
retro_ggor_1199, retro_ggor_1271, retro_ggor_1555, retro_ggor_1612, retro_ggor_1646, retro_ggor_1922, retro_ggor_2370, retro_ggor_305, retro_ggor_762,
Macaca mulatta ENSMMUG00000015306 ortholog_one2one 1 retrogene
retro_mmul_1131,
Nomascus leucogenys ENSNLEG00000001161 ortholog_one2one 2 retrogenes
retro_nleu_1757, retro_nleu_2893,
Otolemur garnettii ENSOGAG00000010144 ortholog_one2one 2 retrogenes
retro_ogar_1416, retro_ogar_1733,
Pongo abelii ENSPPYG00000009302 possible_ortholog 12 retrogenes
retro_pabe_1299, retro_pabe_1397, retro_pabe_1838, retro_pabe_1920, retro_pabe_2171, retro_pabe_2249, retro_pabe_2900, retro_pabe_3512, retro_pabe_3515, retro_pabe_3543, retro_pabe_3823, retro_pabe_407,
Ictidomys tridecemlineatus ENSSTOG00000028367 ortholog_one2one 1 retrogene
retro_itri_326,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_581 58.10 61.05
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Download FASTA sequences of all ENSEEUG00000015171 retrocopies