Parental gene: | FDFT1, ENSEEUG00000013655 |
| Aliases: | None |
| Description: | farnesyl-diphosphate farnesyltransferase 1 [Source:HGNC Symbol;Acc:3629] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_2592:443..32472(+) |
>ENSEEUG00000013655
GCCGAGCTTAGCAGCAGTCTGAAAACCTGCTACCAGTACCTGAATCAGACCAGCCGCAGCTTCTCAGCTGTCATTGAAGC
TCTGGACGGGGATATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCCCTTGAGTTTCGCAATCTGGCAGAACGATATCA
AACAGTCATTGCTGATATTTGTCGACAAATGGGATTTGGAATGGCAGAGTTCTTGGATAAGCAAGTGACATCTGTACGGG
AGTGGGACAAGTATTGCCACTATGTTGCTGGACTGGTAGGAATTGGCCTCTCCCGTCTCTTTGCAGCCTCAAACTTAGAA
GACCCCATAGTTGGTCAAGATTCAGAACTGGCCAACTCAATGGGCCTTTTTTTGCAGAAAACAAATATTATACGTGATTA
TCTAGAAGACCAGCAAGAAGGAAGAGAATTTTGGCCTCAAGAGGTTTGGAGCAAGTATGTTAAGAAGTTGGGTGATTTTA
CTAAGCCCGAGAATATTGATTTGGCTGTGCAGTGCCTGAATGAACTGATCACCAATGCGCTCCAGCACATTCCAGATGTC
ATTACCTACCTCTCAAGACTGAGGAACCAGAGTGTGTTCAACTTCTGTGCTATCCCACAGGTCATGGCCATTGCCACTTT
GGCTGCCTGTTATAACAACCAACAGGTGTTTCGAGGGGTTGTGAAGATTCGAAAGGGACAGGCCGTTACCCTGATGATGG
ATGCCACCAATATGCCAGCTGTTAAAGCTATCATACACCAGTACATGGAGGAGATCTATCATAGAATCCCCAACTCCGAC
CCATCTGTTAGTAAAACACGGAAGATCATTAGCACTGTGCGGACACAGAACCTGTCCACCTGCCAGCTAGCCTCCCGGAG
CCACTACTCCCCTATCTACCTGACATTTGTCATGCTGCTGGCAGCCCTGAGCTGGCAGTACCTGAGCACACTGTCACAAG
TCACAGAAGACATTGTTCAGAGTGGAGAGCACTAA
GCCGAGCTTAGCAGCAGTCTGAAAACCTGCTACCAGTACCTGAATCAGACCAGCCGCAGCTTCTCAGCTGTCATTGAAGC
TCTGGACGGGGATATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCCCTTGAGTTTCGCAATCTGGCAGAACGATATCA
AACAGTCATTGCTGATATTTGTCGACAAATGGGATTTGGAATGGCAGAGTTCTTGGATAAGCAAGTGACATCTGTACGGG
AGTGGGACAAGTATTGCCACTATGTTGCTGGACTGGTAGGAATTGGCCTCTCCCGTCTCTTTGCAGCCTCAAACTTAGAA
GACCCCATAGTTGGTCAAGATTCAGAACTGGCCAACTCAATGGGCCTTTTTTTGCAGAAAACAAATATTATACGTGATTA
TCTAGAAGACCAGCAAGAAGGAAGAGAATTTTGGCCTCAAGAGGTTTGGAGCAAGTATGTTAAGAAGTTGGGTGATTTTA
CTAAGCCCGAGAATATTGATTTGGCTGTGCAGTGCCTGAATGAACTGATCACCAATGCGCTCCAGCACATTCCAGATGTC
ATTACCTACCTCTCAAGACTGAGGAACCAGAGTGTGTTCAACTTCTGTGCTATCCCACAGGTCATGGCCATTGCCACTTT
GGCTGCCTGTTATAACAACCAACAGGTGTTTCGAGGGGTTGTGAAGATTCGAAAGGGACAGGCCGTTACCCTGATGATGG
ATGCCACCAATATGCCAGCTGTTAAAGCTATCATACACCAGTACATGGAGGAGATCTATCATAGAATCCCCAACTCCGAC
CCATCTGTTAGTAAAACACGGAAGATCATTAGCACTGTGCGGACACAGAACCTGTCCACCTGCCAGCTAGCCTCCCGGAG
CCACTACTCCCCTATCTACCTGACATTTGTCATGCTGCTGGCAGCCCTGAGCTGGCAGTACCTGAGCACACTGTCACAAG
TCACAGAAGACATTGTTCAGAGTGGAGAGCACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 47 .27 RPM |
| SRP017611_kidney | 36 .38 RPM |
| SRP017611_brain | 56 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003988 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000007372 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021273 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000006183 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_97 | 88.35 | 53.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000013655 retrocopies