Parental gene: | ENSEEUG00000010549 |
| Aliases: | None |
| Description: | None |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_210:36426..41668(-) |
>ENSEEUG00000010549
ATGGCGGTGGCCCTAGTGGCGTTAAGGACGAGGACAGCTGTTACAGCCCTGCTGAATCCCCCTCAGGCAGCTGCTCTTGC
TGTTAGATATGCATCCAAGAAGACAGGTGGCAGCTCCAAAAACCATGGTGGAAAGTCACCAGGCAAACACTTTGGCATAA
AGAAATTAGAGGGTCACTACGTTCACGCTGGCAACATCCTTGCTACTCAGCGCCACTTTCGCTGGCACCCAGGTGCCCAT
GTGGGATTGGGGAAGAACAAGTGCCTGTATGCCCTGGAGGAGGGCATAGTCCGCTACACCAAGGAGGTTTATGTGCCCAA
TCCCAGCAATTCGGAGGCTGTAGATCTGGTTACCAAGCTACCCAGGGGCGCTGTGCTCTACAAGACGTTTGTCCATGTGG
TTCCTGCCAAACCTGAGGGCACCTTCAAACTGGTGTCTATGCTCTAA
ATGGCGGTGGCCCTAGTGGCGTTAAGGACGAGGACAGCTGTTACAGCCCTGCTGAATCCCCCTCAGGCAGCTGCTCTTGC
TGTTAGATATGCATCCAAGAAGACAGGTGGCAGCTCCAAAAACCATGGTGGAAAGTCACCAGGCAAACACTTTGGCATAA
AGAAATTAGAGGGTCACTACGTTCACGCTGGCAACATCCTTGCTACTCAGCGCCACTTTCGCTGGCACCCAGGTGCCCAT
GTGGGATTGGGGAAGAACAAGTGCCTGTATGCCCTGGAGGAGGGCATAGTCCGCTACACCAAGGAGGTTTATGTGCCCAA
TCCCAGCAATTCGGAGGCTGTAGATCTGGTTACCAAGCTACCCAGGGGCGCTGTGCTCTACAAGACGTTTGTCCATGTGG
TTCCTGCCAAACCTGAGGGCACCTTCAAACTGGTGTCTATGCTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 25 .56 RPM |
| SRP017611_kidney | 55 .32 RPM |
| SRP017611_brain | 22 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017031 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005103 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018851 | ortholog_many2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000023845 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000014252 | ortholog_many2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000009698 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017231 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024414 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004601 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005385 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_9 | 89.62 | 71.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_22 | 83.33 | 89.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_126 | 83.52 | 60.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000010549 retrocopies