Parental gene:

KRT5, ENSEEUG00000009412

Aliases:None
Description:keratin 5 [Source:HGNC Symbol;Acc:6442]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7983:2..6667(-)


>ENSEEUG00000009412
ATGTCTCGCCAGTCGAGTGTGTCTTTCCGGAGCGGGGGCAGCCGTAGCTTCAGCGCTGCCTCAGCCATCACCCCATCTGT
CTCCCGCACCAGCTTCACCTCCGTGTCCCGTTCTGGCGGAGGTGGTGGTGGCTTCGGCAGGATCAGCCTGGGGGGTGCAG
GCGGTGCCGGTGGTGGCTATGGCAGCCGGAGCCTGTACAATGTGGGGTCCTCCAAGAGGATCTCCATGAGCACCGGGGGC
GGCAGCTTCAGGAACCGATTTGGCGGTGCTGGAAGCGGCTATGGCTTGGGAGGAGGCGCAGGGAGCGGATTTGGTTTCGG
CGGTGGAGCTGGTGGTGGCTTTGGGTTCGGTGGTGGATCTGGAGCTGGCTTTGGAGGTGGATTCGGTAGCACTGGCTTCC
CTGTCTGCCCCCCTGGAGGCATCCAGGAGGTCACTGTTAACCAGAGCCTCCTGACGCCTCTCAATCTGCAAATCGACCCC
ACCATCCAGCGGGTGAGGACAGAAGAAAGAGAGCAGATCAAGAGCCTCAACAACAAGTTTGCCTCCTTCATCGACAAGGT
GCGCTTCCTAGAGCAGCAGAACAAGGTCCTGGACACCAAGTGGACCCTGCTCCAGGAGCAGGGCACCAGGACAGTGAGGC
AGAGCTTGGAGCCCCTGTTTGAACAGTATATCAACAACCTCAAGAGGCAGCTGGATGGTGTCCTGGGGGAGAGGGGTCGC
CTGGACTCTGAGCTGAGAAACATGCAGGATTTGGTGGAGGACTTCAAGAACAAGTATGAAGACGAAATCAATAAGCGCAC
CACTGCTGAGAACGAGTTTGTGATGCTGAAGAAGGATGTGGATGCTGCCTACATGAACAAGGTGGAGCTGGAGGCCAGGG
TCGATGCTCTGATGGATAAAATCAACTTCATGAAGATGTTCTTTGAGGCGGAGCTGTCCCAGATACAGACACATGTCTCA
GACACCTCTGTGGTCCTGTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATTGCCGAGGTCAAGGCCCAGTA
TGAGGACATTGCCAACCGCAGCAGGACGGAAGCTGAATCCTGGTACCAGACCAAGTATGAGGAGCTGCAGCAGACTGCAG
GCCGGCATGGCGATGACCTCCGAAACACCAAGCACGAGATTTCCGAGATGAACCGCATGATCCAGAGACTGAGAGCTGAG
ATCGACAATGTAAAGAAGCAGTGCGCCAACCTGCAGAATGCCATTGCTGATGCTGAGCAGCGTGGGGAGCTGGCCCTCAA
GGATGCCAGGAACAAGCTGGCAGAGCTGGAGGACGCCCTGCAGAAGGCCAAGCAGGACATGGCCAGGCTGCTGAGGGAGT
ACCAGGAGCTCATGAATGTGAAGCTGGCCCTGGACGTGGAGATTGCCACCTATAGGAAGCTGCTGGAGGGCGAGGAGTAC
AGACTGAGTGGAGAAGGTGTTGGACCAGTCAATATCTCTGTCGTCACGAACAGCGTCTCTTCTGGCTATGGCGGTGGCAG
TGGCTTTGGTGGAGGCCTTGGCGGGGGTCTTGGCAGTGGTCTTGGCAGTGGTCTTGGTGGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 5 .63 RPM
SRP017611_brain 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011913 ortholog_one2one 4 retrogenes
retro_chof_1848, retro_chof_2381, retro_chof_2385, retro_chof_778,
Echinops telfairi ENSETEG00000007907 ortholog_one2one 1 retrogene
retro_etel_1586,
Nomascus leucogenys ENSNLEG00000017746 ortholog_one2one 5 retrogenes
retro_nleu_2270, retro_nleu_2596, retro_nleu_354, retro_nleu_457, retro_nleu_852,
Pongo abelii ENSPPYG00000004548 ortholog_one2one 1 retrogene
retro_pabe_1103,
Vicugna pacos ENSVPAG00000011707 ortholog_one2one 3 retrogenes
retro_vpac_334, retro_vpac_551, retro_vpac_555,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_521 61.68 51.23
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Download FASTA sequences of all ENSEEUG00000009412 retrocopies