Parental gene: | SRSF1, ENSEEUG00000009255 |
| Aliases: | None |
| Description: | serine/arginine-rich splicing factor 1 [Source:HGNC Symbol;Acc:10780] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | scaffold_379133:33692..35929(+) |
>ENSEEUG00000009255
ATGTCGGGAGGTGGTGTTATTCGTGGCCCAGCAGGGAACAACGATTGCCGTATCTACGTGGGCAACTTACCTCCAGACAT
CCGAACCAAGGACATTGAGGACGTGTTTTACAAATACGGTGCTATCCGTGACATCGACCTCAAGAATCGCCGCGGAGGAC
CGCCCTTCGCCTTCGTGGAATTCGAGGATCCGAGAGACGCGGAAGACGCGGTGTACGGTCGCGACGGCTATGATTACGAT
GGATACCGCTTGCGGGTGGAGTTTCCTCGAAGCGGCCGCGGAACCGGCCGAGGCGGCGGCGGGGGTGGAGGTGGTGGAGC
TCCCCGAGGCCGCTATGGCCCCCCGTCCCGGCGCTCTGAAAACAGAGTGGTTGTCTCTGGACTGCCTCCAAGTGGAAGTT
GGCAGGATTTGAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTTTACCGAGATGGCACTGGTGTCGTG
GAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAACACTAAGTTTAGATCTCATGAGTTCTGTCT
ATTCAATAGGGAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTTATGGAAGATCTCGATCTCG
AAGCCGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTATTCCCCAAGGAGAAGCAGAGGATCAC
CACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACATAAGATGATTGGTGACACTTTTTGTAGAACCCATGTTGT
ATACAGTTTTCCTTTACTCAGTACAATCTTTTCATTTTTTAATTCAAACTGTTTTGTTCAGAATGGGCTAAAGTGTTGA
ATGTCGGGAGGTGGTGTTATTCGTGGCCCAGCAGGGAACAACGATTGCCGTATCTACGTGGGCAACTTACCTCCAGACAT
CCGAACCAAGGACATTGAGGACGTGTTTTACAAATACGGTGCTATCCGTGACATCGACCTCAAGAATCGCCGCGGAGGAC
CGCCCTTCGCCTTCGTGGAATTCGAGGATCCGAGAGACGCGGAAGACGCGGTGTACGGTCGCGACGGCTATGATTACGAT
GGATACCGCTTGCGGGTGGAGTTTCCTCGAAGCGGCCGCGGAACCGGCCGAGGCGGCGGCGGGGGTGGAGGTGGTGGAGC
TCCCCGAGGCCGCTATGGCCCCCCGTCCCGGCGCTCTGAAAACAGAGTGGTTGTCTCTGGACTGCCTCCAAGTGGAAGTT
GGCAGGATTTGAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTTTACCGAGATGGCACTGGTGTCGTG
GAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAACACTAAGTTTAGATCTCATGAGTTCTGTCT
ATTCAATAGGGAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTTATGGAAGATCTCGATCTCG
AAGCCGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTATTCCCCAAGGAGAAGCAGAGGATCAC
CACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACATAAGATGATTGGTGACACTTTTTGTAGAACCCATGTTGT
ATACAGTTTTCCTTTACTCAGTACAATCTTTTCATTTTTTAATTCAAACTGTTTTGTTCAGAATGGGCTAAAGTGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 47 .75 RPM |
| SRP017611_kidney | 141 .78 RPM |
| SRP017611_brain | 91 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000011040 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001234 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_180 | 89.70 | 56.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000009255 retrocopies