Parental gene:

POLD2, ENSEEUG00000006258

Aliases:None
Description:polymerase (DNA directed), delta 2, accessory subunit [Source:HGNC Symbol;Acc:9176]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_1898:12605..19083(-)


>ENSEEUG00000006258
ATGTTTTCTGAGCAGGCTGCCCAGAGGGCCCAGACTCTGCTGTCCCCACCTTCCACCAACAATGCCACTTTTGCCCGTGT
GCCTGTGGTGACCTACAGCAACTCTTCCCAGCCCTTCCGCTTGGGCGAGCGCAGCTTTAACCGCCAATATGCCCACATCT
ATGCCACCCGCCTTGTCCAGATGCGGCCTTTCTTGGAGAGCCGTGCCCAGCAGCACTGGGGCACTGAGGTGCAAATCAAG
AAGCTGTGTGAGCTGCAGCCTGCAGAGAAGTGTTGTGTGGTGGGGACCCTCTTTAAGGCCATGCTGCTCCAGCCCTCCAT
CCTGCGGGAGGTCAGCGAGGAGCACAACTTGGTCCCCCAACCCCCTCGGAGCAAATACATCCACCCGGACGACGAGCTGG
TCCTGGAGGACGAGTTGCAGCGCATCAAGCTAGAGGGCAACATCGCCGTGTCCCGGCTGGTGACAGGGACTGTGCTGGCT
GTACTGGGCTCTGTGCGTGATGATGGCAAGTTCCTGGTGGAGGACCACTGCTTTGCAGAACTTGCGCCCCAGAAGCCCGC
ACCCACCCTGGACTCGGACCGGTTCGTGCTCCTGGTATCTGGCCTGGGGCTGGGTGGTGGCGGCGGTGAGAGCCTGCTGG
GCACCCAGCTGCTGGTGGACGTGGTGACAGGGCAGCTGGGGGATGAGGGAGAGCAGCGCAGTGCCGCCCAAGTGTCCCGC
GTCATCCTGGCTGGGAACCTGCTGAGCCACAGCACCCAGAGCCGGGACTCCATCAACAAGGCCAAGTACCTGACCAAGAA
AACCCAGGCAGCCAGCGTGGAGGCTGTCAAGATGCTGGATGAGATCCTCCTGCAGCTGAGTGCCTCAGTGCCCGTGGATG
TGATGCCAGGAGAATTTGACCCCACCAACTACACGCTCCCCCAGCAGCCCCTGCACCCCTGCATGTTCCCCCTGGCCACG
GCCTACTCCACCCTCCAGCTGGTCACCAACCCCTACCAGGCCACCATTGATGGAGTCAGATTCCTGGGGACATCAGGACA
GAATGTGAGTGACATCTTCAGGTACAGCAGCATGGAGGACCACCTGGAAATTCTGGAGTGGACGTTACGGGTCCGTCACA
TCAGCCCCACAGCCCGTGACACACTTGGTTGCTACCCCTTCTACAAAACTGACCCATTTGTCTTCCCTGAGTGCCCACAT
GTCTACTTCTGTGGCAGCGCCCCCAACTTTGGCTCCAAAGTCATACGAGGTCCTGAGGGCCAGACGGTGCTGCTGGTGGC
TGTCCCGGACTTCAGCACCACGCAGACAGCCTGCCTGGTGAACCTGCGTGGCCTGGCTTGCCAACCCATTAGCTTCTCAG
GCTTTGGGGCTGATGAGGACCTGGGAGACCTGGGCCCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 6 .27 RPM
SRP017611_kidney 21 .94 RPM
SRP017611_brain 5 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002933 ortholog_one2one 1 retrogene
retro_cfam_1870,
Callithrix jacchus ENSCJAG00000007954 ortholog_one2one 1 retrogene
retro_cjac_700,
Homo sapiens ENSG00000106628 ortholog_one2one 1 retrogene
retro_hsap_3217,
Gorilla gorilla ENSGGOG00000004424 ortholog_one2one 2 retrogenes
retro_ggor_2183, retro_ggor_2184,
Pongo abelii ENSPPYG00000017597 ortholog_one2one 1 retrogene
retro_pabe_2665,
Pan troglodytes ENSPTRG00000019138 ortholog_one2one 1 retrogene
retro_ptro_2236,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_303 94.42 99.57
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Download FASTA sequences of all ENSEEUG00000006258 retrocopies