Parental gene: | PEX13, ENSECAG00000019622 |
| Aliases: | None |
| Description: | peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:8855] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 15:40152997..40177146(-) |
>ENSECAG00000019622
ATGGCATCCCAGCCGCCGCCGCCCCCGAAACCCTGGGAGACCCGCCGAATTCCGGGGGCTGGTCCGGGACCAGGACCCGG
CCCCACTTTCCAATCTGCTGATTTGGGTCCTACTTTATTGACAAGACCTGGACAACCAACGCTTACCAGAGTGCCGCCAC
CTATTCTTCCAAGGCCATCACAGCAGACAGGAAGCAGCAGTGTGAACACTTTTAGACCTGCTTACAGTTCATTTTCTTCT
GGATATGGTGCCTATGGAAATTCATTTTATGGAAGCTATAGCCCTTATAGTTATGGATATAATGGGTTGGGCTATAACCG
CCTCCGTTTGGATGATCTTCCACCTAGTAGATTTGTTCAGCAAGCTGAAGAAAGCAGCAGAGGTGCATTTCAGTCCATTG
AAAGTATTGTGCATGCATTTGCCTCTGTCAGTATGATGATGGATGCTACCTTTTCAGCTGTCTATAACAGTTTCAGGGCT
GTATTGGATGTAGCAAATCACTTTTCCCGATTAAAAATACACTTCACAAAGGTCTTTTCAGCTTTTGCATTAGTTAGGAC
TATAAGGTATCTTTATAGACGGTTACAGCGAATGATAGGTTTAAGAGGAGGCTCTGAGAATGAGGACTTATGGGCAGAAA
GTGAAGGAACTGTGGCTTGCCTTGGTGCCGAGGACAGAGCAGCTAATTCAGCAAAATCTTGGCCAATATTCTTATTCTTT
GCTGTAATCCTTGGTGGTCCTTATCTCATCTGGAAACTGCTGTCTACCCACACTGATGAAGTAACAGACAACACCAACTG
GGCAAGTGGTGAGGATGACCATGTAGTTGCTAGAGCGGAATATGATTTTACTGCTGCATCTGAAGAAGAAATTTCTTTCC
GTGCTGGTGATATGCTACATTTAGCTCTCAAAGAACAGCAACCCAAAGTGCGTGGTTGGCTTCTGGCTAGTCTTGATGGT
CAAACAACAGGACTTATACCTGCTAATTATGTCAAAATTCTTGGTAAAAGAAGAGGTAGAAAAACAGTGGAATCCAGTAA
AATTCCCAAGCAGCAACAATCTTTTACCAACACAACACTAATTAAAGGAGCCACGGCCGCTGATTCTTTGGATGAACAGG
AAGCTGCCTTTGAATCTGTTTTTGTTGAAACTTGTAAGGTTCCAGTTGCACCTGATTCCACTGGGAAAAGTGGCGATAAA
CAAGATCTTTGA
ATGGCATCCCAGCCGCCGCCGCCCCCGAAACCCTGGGAGACCCGCCGAATTCCGGGGGCTGGTCCGGGACCAGGACCCGG
CCCCACTTTCCAATCTGCTGATTTGGGTCCTACTTTATTGACAAGACCTGGACAACCAACGCTTACCAGAGTGCCGCCAC
CTATTCTTCCAAGGCCATCACAGCAGACAGGAAGCAGCAGTGTGAACACTTTTAGACCTGCTTACAGTTCATTTTCTTCT
GGATATGGTGCCTATGGAAATTCATTTTATGGAAGCTATAGCCCTTATAGTTATGGATATAATGGGTTGGGCTATAACCG
CCTCCGTTTGGATGATCTTCCACCTAGTAGATTTGTTCAGCAAGCTGAAGAAAGCAGCAGAGGTGCATTTCAGTCCATTG
AAAGTATTGTGCATGCATTTGCCTCTGTCAGTATGATGATGGATGCTACCTTTTCAGCTGTCTATAACAGTTTCAGGGCT
GTATTGGATGTAGCAAATCACTTTTCCCGATTAAAAATACACTTCACAAAGGTCTTTTCAGCTTTTGCATTAGTTAGGAC
TATAAGGTATCTTTATAGACGGTTACAGCGAATGATAGGTTTAAGAGGAGGCTCTGAGAATGAGGACTTATGGGCAGAAA
GTGAAGGAACTGTGGCTTGCCTTGGTGCCGAGGACAGAGCAGCTAATTCAGCAAAATCTTGGCCAATATTCTTATTCTTT
GCTGTAATCCTTGGTGGTCCTTATCTCATCTGGAAACTGCTGTCTACCCACACTGATGAAGTAACAGACAACACCAACTG
GGCAAGTGGTGAGGATGACCATGTAGTTGCTAGAGCGGAATATGATTTTACTGCTGCATCTGAAGAAGAAATTTCTTTCC
GTGCTGGTGATATGCTACATTTAGCTCTCAAAGAACAGCAACCCAAAGTGCGTGGTTGGCTTCTGGCTAGTCTTGATGGT
CAAACAACAGGACTTATACCTGCTAATTATGTCAAAATTCTTGGTAAAAGAAGAGGTAGAAAAACAGTGGAATCCAGTAA
AATTCCCAAGCAGCAACAATCTTTTACCAACACAACACTAATTAAAGGAGCCACGGCCGCTGATTCTTTGGATGAACAGG
AAGCTGCCTTTGAATCTGTTTTTGTTGAAACTTGTAAGGTTCCAGTTGCACCTGATTCCACTGGGAAAAGTGGCGATAAA
CAAGATCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 2 .61 RPM |
| SRP021940_embryo | 4 .55 RPM |
| SRP021940_cerebellum | 2 .75 RPM |
| SRP021940_testis | 12 .34 RPM |
| SRP021940_placental_villous | 4 .33 RPM |
| SRP021940_articular_cartilage | 3 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012871 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000028969 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020283 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_403 | 95.79 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000019622 retrocopies