Parental gene:

CENPK, ENSECAG00000019165

Aliases:None
Description:centromere protein K [Source:HGNC Symbol;Acc:29479]
Organism:Horse (Equus caballus)
Coordinates:21:8030894..8058941(+)


>ENSECAG00000019165
ATGTCAGTGAATCAGCAAGATCTAGATCCAGATAGTACTACAGAAGTGGAAGATGTTACAGATGCTGAAGAAGAACTTAT
TAAAGAATGTGAAGAACTGTGGAAAGATATGGAAGAATGTCAGAATAAACTATCACTTGTTGGAACTGAGACACTCACTG
AATCAAATGCTCAGCTATCATTATTAATTATGCAAATGAAATGTTTGACTGCTGAACTCAGTCAATGGCAGAAAGAAACT
CCTAAAATAATTCCACTGAATGAAGAAGTTCTGCTAACATTAGGAAAAGAAGAGTTCCAAAAATTGAGACATGATCTTGA
ATTGGTACTCTCCACTATTCAGTCAAAGAATGAAAAGTTAAAGGAAGACCTGGAAAGGGAGCAACAATGGTTGAAAGAAC
AGCAACAGCTCCTGGAATCTCTTAATGTACTACACAAGGAATTGAAACAGCAGGTTGTGACAGTTTCTGAATCAAGAATC
TTTAATGAACTAAAAACTAAAATGCATGATATAAAAGAATATAAGGAGAAACTCTTGATTACCTTGGGTGAGTTTCTAGA
AGACCATTTTCCTCTGCCTGATAGAAATGTTAAAAAGAAAAAGAAAAACGTTCAAGAATCCACTGCACAGCTGATAACAC
TGCATGAAATGTTAGAGATTCTTTTAAATAGATTATTTGATGTTCCACATGATCCATATGTCAAAATTAGTGATTCTTTT
TGGCCACCATATATGGAGCTGCTCCTGCGTAATGGAATTGCCTTGAGACATCCAGAAGATCCAACCCGAATAAGATTAGA
AGCCTACCATCAGTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 0 .55 RPM
SRP021940_embryo 4 .45 RPM
SRP021940_cerebellum 0 .16 RPM
SRP021940_testis 1 .02 RPM
SRP021940_placental_villous 0 .19 RPM
SRP021940_articular_cartilage 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013993 ortholog_one2one 1 retrogene
retro_chof_1252,
Dipodomys ordii ENSDORG00000007357 ortholog_one2one 1 retrogene
retro_dord_787,
Erinaceus europaeus ENSEEUG00000005831 ortholog_one2one 1 retrogene
retro_eeur_81,
Monodelphis domestica ENSMODG00000019645 ortholog_one2one 1 retrogene
retro_mdom_1446,
Oryctolagus cuniculus ENSOCUG00000011568 ortholog_one2many 2 retrogenes
retro_ocun_1199, retro_ocun_74,
Tursiops truncatus ENSTTRG00000006527 ortholog_one2one 1 retrogene
retro_ttru_1310,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_181 72.66 50.92
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Download FASTA sequences of all ENSECAG00000019165 retrocopies