Parental gene:

CNBP, ENSECAG00000009512

Aliases:None
Description:CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164]
Organism:Horse (Equus caballus)
Coordinates:16:1542397..1552071(+)


>ENSECAG00000009512
ATGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATGCCCTACTGGCGGAGGCCGTGGTCG
TGGAATGAGAAGCCGTGGCAGAGGTTTCCAGTTTGTTTCCTCATCTCTTCCAGACATCTGTTATCGCTGTGGTGAGTCTG
GTCATCTTGCCAAGGATTGTGATCTTCAGGAGGATGCCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGC
AAGGAGCCGAAGAGAGAGCGAGAGCAATGCTGCTACAACTGTGGCAAACCAGGCCATCTGGCTCGTGACTGTGACCACGC
GGATGAGCAGAAGTGCTATTCTTGTGGAGAATTTGGGCACATTCAAAAAGACTGCACCAAAGTGAAATGCTATAGGTGTG
GTGAAACCGGTCATGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTGGCGAGTCAGGGCACCTT
GCACGGGAATGCACGATTGAGGCTACAGCTTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 118 .62 RPM
SRP021940_embryo 153 .79 RPM
SRP021940_cerebellum 176 .15 RPM
SRP021940_testis 152 .06 RPM
SRP021940_placental_villous 126 .29 RPM
SRP021940_articular_cartilage 192 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012159 ortholog_one2one 1 retrogene
retro_btau_19,
Callithrix jacchus ENSCJAG00000017430 ortholog_one2one 1 retrogene
retro_cjac_4079,
Echinops telfairi ENSETEG00000008408 ortholog_one2one 5 retrogenes
retro_etel_12, retro_etel_1791, retro_etel_2192, retro_etel_237, retro_etel_583,
Felis catus ENSFCAG00000028042 possible_ortholog 2 retrogenes
retro_fcat_1922, retro_fcat_2001,
Loxodonta africana ENSLAFG00000002502 ortholog_one2one 1 retrogene
retro_lafr_49,
Oryctolagus cuniculus ENSOCUG00000008696 ortholog_one2one 2 retrogenes
retro_ocun_1626, retro_ocun_208,
Otolemur garnettii ENSOGAG00000013898 possible_ortholog 1 retrogene
retro_ogar_144,
Pteropus vampyrus ENSPVAG00000015070 ortholog_one2one 1 retrogene
retro_pvam_908,
Sorex araneus ENSSARG00000011874 ortholog_one2one 1 retrogene
retro_sara_397,
Sarcophilus harrisii ENSSHAG00000017132 ortholog_one2one 1 retrogene
retro_shar_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1072 77.06 100.00
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Download FASTA sequences of all ENSECAG00000009512 retrocopies