Parental gene:

ENSECAG00000009507

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:1:57383147..57406524(+)


>ENSECAG00000009507
CAGAGTTTTCTTGGAGGCTTTTTTGGTCCCATTTGTGAGATCGATGTTGTCCTTAATGATGGGGAAACCAGGAAAATGGC
AGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTATCTTTTCTATGATGGAGAATCTGTTTCGGGAAAGGTAAACC
TAGCCTTTAAGCAACCTGGAAAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAAT
GACAAGAGTAATACTCACGAATTTGTAAACCTAGTGAAAGAACTGGCCTTACCTGGAGAACTGACTCAGAGCAGAAGTTA
TGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCTTACATCGGTGCCAATGTCCGCTTGAGGTATTTTCTTAAAG
TGACAATAGTAAGAAGACTGACAGACTTGGTAAAATATGATCTTATTGTTCACCAGCTTGCCACCTATCCTGATGTTAAC
AACTCTATTAAGATGGAAGTGGGCATTGAAGATTGTCTACACATAGAATTTGAATATAATAAATCAAAGTATCATTTAAA
GGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGAATAAAAATCCAACATATGGAGTTACAACTGATCAAAAAAG
AGATCACAGGAATTGGACCCAGTACCACAACAGAAACGGAAACAATTGCTAAATATGAAATAATGGATGGTGCACCAGTA
AAAGGTGAATCAATTCCAATAAGACTATTTTTAGCGGGATATGACCCAACTCCAACAATGAGAGATGTGAACAAAAAATT
TTCCGTAAGGTACTTTTTGAATCTAGTCCTTGTTGATGAGGAAGACAGAAGGTACTTCAAGCAGCAGGAAATCATTTTAT
GGAGAAAAGCTCCTGAAAAACTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCTCCAGAATCACAGGCATCT
GCTGAACAGCCTGAAATGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 1 .40 RPM
SRP021940_embryo 1 .71 RPM
SRP021940_cerebellum 1 .09 RPM
SRP021940_testis 5 .50 RPM
SRP021940_placental_villous 2 .17 RPM
SRP021940_articular_cartilage 1 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013827 ortholog_one2many 1 retrogene
retro_cfam_1133,
Choloepus hoffmanni ENSCHOG00000007324 ortholog_one2many 5 retrogenes
retro_chof_1303, retro_chof_1663, retro_chof_1796, retro_chof_2352, retro_chof_242,
Callithrix jacchus ENSCJAG00000012907 ortholog_one2many 1 retrogene
retro_cjac_1420,
Homo sapiens ENSG00000122958 ortholog_one2many 1 retrogene
retro_hsap_2688,
Gorilla gorilla ENSGGOG00000010433 ortholog_one2many 1 retrogene
retro_ggor_1875,
Microcebus murinus ENSMICG00000014940 ortholog_one2many 1 retrogene
retro_mmur_1070,
Mustela putorius furo ENSMPUG00000004519 ortholog_many2many 1 retrogene
retro_mputfur_146,
Nomascus leucogenys ENSNLEG00000011548 ortholog_one2many 1 retrogene
retro_nleu_1187,
Pongo abelii ENSPPYG00000002386 ortholog_one2many 1 retrogene
retro_pabe_2293,
Pan troglodytes ENSPTRG00000002567 ortholog_one2many 3 retrogenes
retro_ptro_1815, retro_ptro_2245, retro_ptro_4,
Tupaia belangeri ENSTBEG00000015348 ortholog_one2many 1 retrogene
retro_tbel_1425,
Vicugna pacos ENSVPAG00000000630 ortholog_one2many 1 retrogene
retro_vpac_385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_17 99.08 99.69
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Download FASTA sequences of all ENSECAG00000009507 retrocopies