Parental gene: | NIPSNAP3B, ENSECAG00000008088 |
| Aliases: | None |
| Description: | nipsnap homolog 3B (C. elegans) [Source:HGNC Symbol;Acc:23641] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 25:11010920..11018161(+) |
>ENSECAG00000008088
CAGATGTGTTCATCTTTTGCTACGGGCCCCAGACAATACGATGGAACGTTCTATGAATTTCGTACTTATTGCCTTAAACC
TTCAAAGATGAATGAGTATATGGAAAAGATTAAGAAAAACATTCATCTTCGGACAGCTCACTCGGAGTTGGTTGGATTCT
GGAGTGTAGAATTTGGAGGCAGAATGAATAAAGTGTTTCATATTTGGAAGTATGATAATTTTGCTCATCGCACTGAAGTT
CGGAAAGCCTTGGCCAAAGATAGGGAATGGCAAGAACAGTTTCTCATTCCAAGTTTGGCTCTCATTGATAAACAAGAGTT
TGAGATTGCTTACCTGGTGCCATGGAGCAAATTAGAAAAACCTCCAAAAGAAGGAGTCTATGAACTGGCTACTTTTCAGA
TGAAACCAGGTGGGCCAGCTCTGTGGGGTGAGCCATTTAAAAGGGCAGTTAATGCCCATGTCAATCGAGGCTACTCAAAG
CTAGTTGGAGTTTTCCACACAGAATACGGCACTCTCAACAGAGTTCACGTTCTTTGGTGGAATGAAAGTGCAGATAGTCG
TGCAGCTGGGAGACATGAGTCTCATGAGGATCCCAGAGTTGTGGCGGCGGTTCGGGAAAGTGTCAATTACCTAGTGTCTC
AACAAAATATGCTTCTGATTCCTGCATCATTTTCACCATTGAAATAG
CAGATGTGTTCATCTTTTGCTACGGGCCCCAGACAATACGATGGAACGTTCTATGAATTTCGTACTTATTGCCTTAAACC
TTCAAAGATGAATGAGTATATGGAAAAGATTAAGAAAAACATTCATCTTCGGACAGCTCACTCGGAGTTGGTTGGATTCT
GGAGTGTAGAATTTGGAGGCAGAATGAATAAAGTGTTTCATATTTGGAAGTATGATAATTTTGCTCATCGCACTGAAGTT
CGGAAAGCCTTGGCCAAAGATAGGGAATGGCAAGAACAGTTTCTCATTCCAAGTTTGGCTCTCATTGATAAACAAGAGTT
TGAGATTGCTTACCTGGTGCCATGGAGCAAATTAGAAAAACCTCCAAAAGAAGGAGTCTATGAACTGGCTACTTTTCAGA
TGAAACCAGGTGGGCCAGCTCTGTGGGGTGAGCCATTTAAAAGGGCAGTTAATGCCCATGTCAATCGAGGCTACTCAAAG
CTAGTTGGAGTTTTCCACACAGAATACGGCACTCTCAACAGAGTTCACGTTCTTTGGTGGAATGAAAGTGCAGATAGTCG
TGCAGCTGGGAGACATGAGTCTCATGAGGATCCCAGAGTTGTGGCGGCGGTTCGGGAAAGTGTCAATTACCTAGTGTCTC
AACAAAATATGCTTCTGATTCCTGCATCATTTTCACCATTGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 2 .96 RPM |
| SRP021940_embryo | 4 .01 RPM |
| SRP021940_cerebellum | 3 .95 RPM |
| SRP021940_testis | 1 .66 RPM |
| SRP021940_placental_villous | 3 .70 RPM |
| SRP021940_articular_cartilage | 2 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014253 | possible_ortholog | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000005118 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000000943 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016120 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007103 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_978 | 67.12 | 92.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000008088 retrocopies