Parental gene: | Clic1, ENSDORG00000016424 |
| Aliases: | None |
| Description: | chloride intracellular channel 1 [Source:MGI Symbol;Acc:MGI:2148924] |
| Organism: | Kangaroo rat (Dipodomys ordii) |
| Coordinates: | GeneScaffold_6611:13929..20420(-) |
>ENSDORG00000016424
ATGGCCGAAGAACAGCCTCAGGTCGAATTGTTCGTGAAGGCTGGCAGTGATGGGGCCAAGATCGGGAACTGCCCCTTCTC
CCAGAGGCTCTTCATGGTACTGTGGCTCAAAGGAGTCACCTTCAACGTCACCACGGTTGACACCAAAAGGCGGACAGAGA
CGGTGCAGAAGCTGTGTCCAGGAGGGCAGCTCCCATTCCTGCTGTATGGCACTGAAGTACACACAGACACCAACAAGATT
GAGGAATTTCTAGAGGCAGTGCTGTGCCCTCCCAGGTACCCGAAGCTGGCAGCTCTGAACCCTGAGTCCAACACAGCTGG
GTTGGACATATTTGCCAAATTTTCTGCCTACATCAAGAATTCAAACCCAGCACTCAATGACAATCTGGAGAAGGGACTCC
TGAAAGCCCTGAAGATCTTAGACAATTACCTGACATCCCCCCTCCCAGAAGAAGTGGATGAGACCAGTGCAGAAGATGAA
GGTGTCTCTCAAAGAAAATTTCTGGATGGCAATGAGCTCACCCTGGCTGACTGCAACCTGTTGCCAAAGCTGCACATAGT
ACAGGTGGTATGTAAGAAGTACAGGGGATTCACCATCCCTGAGGCTTTTCGAGGAGTACATCGGTACTTGAGCAATGCCT
ATGCTCGGGAAGAATTTGCCTCCACTTGTCCAGATGACGAAGAGATAGAATTGGCCTATGAGCAAGTGGCCAAGGCCCTC
AAATAA
ATGGCCGAAGAACAGCCTCAGGTCGAATTGTTCGTGAAGGCTGGCAGTGATGGGGCCAAGATCGGGAACTGCCCCTTCTC
CCAGAGGCTCTTCATGGTACTGTGGCTCAAAGGAGTCACCTTCAACGTCACCACGGTTGACACCAAAAGGCGGACAGAGA
CGGTGCAGAAGCTGTGTCCAGGAGGGCAGCTCCCATTCCTGCTGTATGGCACTGAAGTACACACAGACACCAACAAGATT
GAGGAATTTCTAGAGGCAGTGCTGTGCCCTCCCAGGTACCCGAAGCTGGCAGCTCTGAACCCTGAGTCCAACACAGCTGG
GTTGGACATATTTGCCAAATTTTCTGCCTACATCAAGAATTCAAACCCAGCACTCAATGACAATCTGGAGAAGGGACTCC
TGAAAGCCCTGAAGATCTTAGACAATTACCTGACATCCCCCCTCCCAGAAGAAGTGGATGAGACCAGTGCAGAAGATGAA
GGTGTCTCTCAAAGAAAATTTCTGGATGGCAATGAGCTCACCCTGGCTGACTGCAACCTGTTGCCAAAGCTGCACATAGT
ACAGGTGGTATGTAAGAAGTACAGGGGATTCACCATCCCTGAGGCTTTTCGAGGAGTACATCGGTACTTGAGCAATGCCT
ATGCTCGGGAAGAATTTGCCTCCACTTGTCCAGATGACGAAGAGATAGAATTGGCCTATGAGCAAGTGGCCAAGGCCCTC
AAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000621 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002788 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000019049 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011331 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000015201 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000029827 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000015240 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006264 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022545 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031840 | ortholog_one2one | 4 retrogenes | |
| Procavia capensis | ENSPCAG00000013268 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016456 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017982 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000006493 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001540 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dord_506 | 79.41 | 56.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dord_524 | 80.26 | 62.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dord_550 | 82.55 | 61.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDORG00000016424 retrocopies