Parental gene: | Smek1, ENSDORG00000012467 |
| Aliases: | None |
| Description: | SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1915984] |
| Organism: | Kangaroo rat (Dipodomys ordii) |
| Coordinates: | GeneScaffold_1148:1637..33688(-) |
>ENSDORG00000012467
TCTCTACTTTTAGAGTCCAAAATAAACCCTAACACTGCATACCAGAAACAACAGGACACTCTGATTGTGTGGTCTGAAGC
AGAAAATTATGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGTGATGAAATTTGGGAGAAAATATGTCAGGTTCAAG
GAAAGGATCCATCAGTGGACATCACTCAGGACCTTGTGGATGAATCTGAAGAGGAGCGATTTGATGATATGTCTTCACCA
GGTTTAGAATTGCCATCTTGTGAATTAAGTCGACTTGAGGAAATTGCAGAACTTGTGGCATCATCATTACCTTCCCCCCT
CCGCCGCGAGAAACTTGCACTAGCACTGGAAAATGAGGGTTATATTAAAAAGCTCTTAGAGCTTTTTCATGTGTGTGAGG
ATTTAGAAAATATTGAAGGACTCCACCACTTATATGAAATTATCAAAGGCATCTTTCTCTTGAATCGGACTGCTCTTTTT
GAGGTTATGTTTTCTGAAGAATGTATAATGGACGTCATTGGATGCTTAGAATATGATCCTGCTTTATCACAACCTCGAAA
ACACAGGGAATTTCTAACAAAAACAGCAAAGTTTAAAGAAGTTATTCCCATATCAGATCCTGAACTGAAACAAAAAATTC
ATCAGACATACAGAGTTCAGTATATACAAGATATGGTTCTTCCTACCCCTTCAGTCTTTGAAGAAAACATGTTATCAACA
CTTCACTCCTTCATCTTTTTCAATAAGGTAGAAATTGTTGGTATGTTACAGGAAGATGAAAAATTTCTGACAGATTTGTT
TGCACAACTAACAGACGAAGCAACAGATGAGGAAAAAAGACAGGAATTGGTTAACTTTTTAAAAGAATTCTGTGCGTTTT
CTCAAACGCTACAACCCCAAAACAGAGATGCTTTTTTCAAGACTTTGTCAAACATGGGCATATTACCAGCTTTAGAAGTC
ATCCTTGGCATGGATGATACACAAGTACGAAGTGCTGCTACTGATATATTCTCATACTTGGTTGAATATAATCCATCCAT
GGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGACATTTTGCTCATCAACCTCATTATAGAACATATGA
TTTGTGATACAGATCCTGAACTTGGAGGAGCAGTCCAACTTATGGGCCTGCTTCGAACTTTAGTTGACCCAGAGAACATG
CTAGCCACTGCCAATAAAACAGAGAAGACTGAATTTCTGGGTTTCTTCTACAAGCATTGTATGCATGTTCTCACTGCTCC
TTTACTGGCAAATACAACAGAAGACAAGCCTAGTAAAGATGACCAAACTGCACAGTTACTGGCACTTGTACTGGAATTAC
TAACTTTTTGTGTGGAGCACCATACCTACCACATAAAGAACTATATTATCAACAAGGATATCCTCCGCAGAGTACTGGTT
CTTATGGCCTCAAAACATGCTTTCTTGGCATTATGTGCCCTTCGTTTTAAGAGAAAGATTATTGGCCTAAAAGATGAGTT
TTATAACCGCTACATAATGAAAAGTTTTTTATTTGAACCGGTAGTCAAAGCATTTCTCAACAATGGATCCCGCTACAATT
TGATGAACTCTGCCATAATAGAAATGTTTGAATTTATTAGAGTGGAAGATATAAAATCATTAACTGCTCATGTAATTGAA
AATTACTGGAAAGCACTGGAAGATGTTGATTATGTGCAGACATTTAAAGGATTAAAACTGAGATTTGAACAACAAAGAGA
AAGACAAGACAACCCCAAACTTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAGAAAGTGAGGAAAAAGA
GGTGCTTCTGAAAACGAATCTTTCTGGACGGCAGAGCCCAAGTTTTAAGCTTTCCCTGTCCAGCGGGACAAAAACTAACC
TCACCAGCCAGTCATCGGCAAACCTGCCAGGATCTCCAGGATCACCTGGATCCCCAGGGTCTCCAGGCTCTCCTGGATCC
GTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTTGTGGGTCTGGTAGATTATCCTGATGATGA
TGAAGATGATGATGAGGATGAAGACAAGGAAGACACTCTACCATTGTCAAAGAAAGCAAAATTTGAGTCATAA
TCTCTACTTTTAGAGTCCAAAATAAACCCTAACACTGCATACCAGAAACAACAGGACACTCTGATTGTGTGGTCTGAAGC
AGAAAATTATGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGTGATGAAATTTGGGAGAAAATATGTCAGGTTCAAG
GAAAGGATCCATCAGTGGACATCACTCAGGACCTTGTGGATGAATCTGAAGAGGAGCGATTTGATGATATGTCTTCACCA
GGTTTAGAATTGCCATCTTGTGAATTAAGTCGACTTGAGGAAATTGCAGAACTTGTGGCATCATCATTACCTTCCCCCCT
CCGCCGCGAGAAACTTGCACTAGCACTGGAAAATGAGGGTTATATTAAAAAGCTCTTAGAGCTTTTTCATGTGTGTGAGG
ATTTAGAAAATATTGAAGGACTCCACCACTTATATGAAATTATCAAAGGCATCTTTCTCTTGAATCGGACTGCTCTTTTT
GAGGTTATGTTTTCTGAAGAATGTATAATGGACGTCATTGGATGCTTAGAATATGATCCTGCTTTATCACAACCTCGAAA
ACACAGGGAATTTCTAACAAAAACAGCAAAGTTTAAAGAAGTTATTCCCATATCAGATCCTGAACTGAAACAAAAAATTC
ATCAGACATACAGAGTTCAGTATATACAAGATATGGTTCTTCCTACCCCTTCAGTCTTTGAAGAAAACATGTTATCAACA
CTTCACTCCTTCATCTTTTTCAATAAGGTAGAAATTGTTGGTATGTTACAGGAAGATGAAAAATTTCTGACAGATTTGTT
TGCACAACTAACAGACGAAGCAACAGATGAGGAAAAAAGACAGGAATTGGTTAACTTTTTAAAAGAATTCTGTGCGTTTT
CTCAAACGCTACAACCCCAAAACAGAGATGCTTTTTTCAAGACTTTGTCAAACATGGGCATATTACCAGCTTTAGAAGTC
ATCCTTGGCATGGATGATACACAAGTACGAAGTGCTGCTACTGATATATTCTCATACTTGGTTGAATATAATCCATCCAT
GGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGACATTTTGCTCATCAACCTCATTATAGAACATATGA
TTTGTGATACAGATCCTGAACTTGGAGGAGCAGTCCAACTTATGGGCCTGCTTCGAACTTTAGTTGACCCAGAGAACATG
CTAGCCACTGCCAATAAAACAGAGAAGACTGAATTTCTGGGTTTCTTCTACAAGCATTGTATGCATGTTCTCACTGCTCC
TTTACTGGCAAATACAACAGAAGACAAGCCTAGTAAAGATGACCAAACTGCACAGTTACTGGCACTTGTACTGGAATTAC
TAACTTTTTGTGTGGAGCACCATACCTACCACATAAAGAACTATATTATCAACAAGGATATCCTCCGCAGAGTACTGGTT
CTTATGGCCTCAAAACATGCTTTCTTGGCATTATGTGCCCTTCGTTTTAAGAGAAAGATTATTGGCCTAAAAGATGAGTT
TTATAACCGCTACATAATGAAAAGTTTTTTATTTGAACCGGTAGTCAAAGCATTTCTCAACAATGGATCCCGCTACAATT
TGATGAACTCTGCCATAATAGAAATGTTTGAATTTATTAGAGTGGAAGATATAAAATCATTAACTGCTCATGTAATTGAA
AATTACTGGAAAGCACTGGAAGATGTTGATTATGTGCAGACATTTAAAGGATTAAAACTGAGATTTGAACAACAAAGAGA
AAGACAAGACAACCCCAAACTTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAGAAAGTGAGGAAAAAGA
GGTGCTTCTGAAAACGAATCTTTCTGGACGGCAGAGCCCAAGTTTTAAGCTTTCCCTGTCCAGCGGGACAAAAACTAACC
TCACCAGCCAGTCATCGGCAAACCTGCCAGGATCTCCAGGATCACCTGGATCCCCAGGGTCTCCAGGCTCTCCTGGATCC
GTCCCTAAGAGTACATCTCAGACGGCAGCTATTACCACAAAGGGAGGACTTGTGGGTCTGGTAGATTATCCTGATGATGA
TGAAGATGATGATGAGGATGAAGACAAGGAAGACACTCTACCATTGTCAAAGAAAGCAAAATTTGAGTCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000006324 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006638 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015294 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008535 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010333 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013598 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000002765 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dord_714 | 57.11 | 56.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDORG00000012467 retrocopies