Parental gene: | CMBL, ENSDNOG00000024697 |
| Aliases: | None |
| Description: | carboxymethylenebutenolidase homolog (Pseudomonas) [Source:HGNC Symbol;Acc:25090] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4252:3850..27051(-) |
>ENSDNOG00000024697
ACCATCGTCCCAGACTTCTTCACGGGGCAGCCGCCGTGGCACCCCTCTTACGACTGGGCCGCCTTCCCCGAGTGGGTGAA
GACGCGCAACGCCAGGACGGTGGATAAGGAGATAGATGCCGTCTTGAAGTATCTGAAGCAACAGTGCCATGCCCAGAAAG
TCGGCGTCGTGGGGTTCTGCTGGGGTGGCGTAGCCGTCCATCACGTGATGACGAAATACTCGGAATTCCGGGCAGGCGTG
TCCGTCTATGGCATTGTCAAGGATTTTGAAGACATTTACAGTTTAAAGAACCCCACGTTGTTTATTTTTGCTGAAAATGA
TGCAGTGATTTCTCTTGAGCAAGTCTCTCTGCTGACCCAGAAGTTGAAAGAACACTGCAAAGTTGAATATCAGGTTAAAA
CATTTTCTGGGCAAACGCATGGCTTTGTGCACCGAAAGAGAGAAGATTGTTCCCCTGCAGACAAGCCGTATGTTGAGGAG
GCGAGGAGGAATCTGATTGAGTGGCTGAACAAGTACGTTTAG
ACCATCGTCCCAGACTTCTTCACGGGGCAGCCGCCGTGGCACCCCTCTTACGACTGGGCCGCCTTCCCCGAGTGGGTGAA
GACGCGCAACGCCAGGACGGTGGATAAGGAGATAGATGCCGTCTTGAAGTATCTGAAGCAACAGTGCCATGCCCAGAAAG
TCGGCGTCGTGGGGTTCTGCTGGGGTGGCGTAGCCGTCCATCACGTGATGACGAAATACTCGGAATTCCGGGCAGGCGTG
TCCGTCTATGGCATTGTCAAGGATTTTGAAGACATTTACAGTTTAAAGAACCCCACGTTGTTTATTTTTGCTGAAAATGA
TGCAGTGATTTCTCTTGAGCAAGTCTCTCTGCTGACCCAGAAGTTGAAAGAACACTGCAAAGTTGAATATCAGGTTAAAA
CATTTTCTGGGCAAACGCATGGCTTTGTGCACCGAAAGAGAGAAGATTGTTCCCCTGCAGACAAGCCGTATGTTGAGGAG
GCGAGGAGGAATCTGATTGAGTGGCTGAACAAGTACGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 18 .09 RPM |
| SRP012922_cerebellum | 3 .16 RPM |
| SRP012922_heart | 13 .23 RPM |
| SRP012922_kidney | 141 .28 RPM |
| SRP012922_liver | 162 .24 RPM |
| SRP012922_lung | 8 .09 RPM |
| SRP012922_quadricep_muscle | 57 .29 RPM |
| SRP012922_spleen | 13 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009759 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009079 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000000533 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016909 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001698 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1840 | 68.87 | 86.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2561 | 62.38 | 57.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000024697 retrocopies