Parental gene:

SPOPL, ENSDNOG00000014763

Aliases:None
Description:speckle-type POZ protein-like [Source:HGNC Symbol;Acc:27934]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3859:3269..122811(+)


>ENSDNOG00000014763
ATGTCCCGGGAACCCACCCCACCTCTATTTGGAGAGATGTCTACTGGTCCTATAGCTGAAAGTTGGTGTTACACACAGGT
TAAAGTTGTAAAATTTTCCTACATGTGGACTATTAATAACTTCAGTTTTTGTCGAGAAGAAATGGGTGAAGTGTTAAAAA
GTTCAACGTTTTCATCTGGCCCAAATGATAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTATATTTGCTTTTAGTCAGCTGCCCAAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCTCTTCT
GAATGCTAAAAGGGAAGAGACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTACAGGGAAAAGACTGGGGTTTTA
AAAAATTCATTAGAAGGGATTTTTTGCTTGATGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACATTATTTTGTGAG
GTGAGTGTGGTTCAAGATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGACTAGC
AGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGATTGCAGTTTTTTTGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTGCTTGCAGCGCGTTCCCCAGTTTTCAATGCAATGTTTGAACATGAAATGGAAGAAAGCAAAAAGAATCAA
GTGGAAATAAATGATGTAGACCCTGAGGTTTTTAAGGAAATGATGGGATTCATTTATACAGGAAAAGCACCAAACCTTGA
CAAAATGGCTGACAATTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGTGAGGAAGCTTTGT
GTAGTAACCTCACAGTAGAAAATGTTGCTGATACCCTTGTCCTAGCAGATTTGCACAGTGCAGAGCAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAACTTGGTTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGC
AGCAGACATAATGGAAACATCAGGATGGAAGTCCATGATACAGTCTCACCCTCATTTAGTAGCAGAAGCCTTCCGAGCAC
TAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAACGGCTAAAACAGTCCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 15 .17 RPM
SRP012922_cerebellum 7 .56 RPM
SRP012922_heart 1 .16 RPM
SRP012922_kidney 5 .75 RPM
SRP012922_liver 5 .26 RPM
SRP012922_lung 7 .79 RPM
SRP012922_quadricep_muscle 1 .73 RPM
SRP012922_spleen 8 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000144228 ortholog_one2one 2 retrogenes
retro_hsap_2943, retro_hsap_3048,
Gorilla gorilla ENSGGOG00000016285 ortholog_one2one 1 retrogene
retro_ggor_2040,
Macaca mulatta ENSMMUG00000002560 ortholog_one2one 2 retrogenes
retro_mmul_1884, retro_mmul_1885,
Nomascus leucogenys ENSNLEG00000013800 ortholog_one2one 1 retrogene
retro_nleu_1629,
Oryctolagus cuniculus ENSOCUG00000006944 ortholog_one2one 1 retrogene
retro_ocun_1842,
Pongo abelii ENSPPYG00000012825 ortholog_one2one 4 retrogenes
retro_pabe_2438, retro_pabe_2439, retro_pabe_2440, retro_pabe_2599,
Pan troglodytes ENSPTRG00000012504 ortholog_one2one 2 retrogenes
retro_ptro_1991, retro_ptro_2054,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_546 69.43 57.14
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Download FASTA sequences of all ENSDNOG00000014763 retrocopies