Parental gene: | C19orf40, ENSDNOG00000014134 |
| Aliases: | None |
| Description: | chromosome 19 open reading frame 40 [Source:HGNC Symbol;Acc:28467] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2415:105567..107811(+) |
>ENSDNOG00000014134
ATGGAAAGCGGACCCCCTGTTGCCACGGGCCCCATAGACGTGCCTTTGGGGCACATTGTGGCCAATGAGAAATGGCGCGG
GTCGCAGCTGGCCCTGGGGATGCAAGGGAAAATTAAACTCACTTTTGAGGATGGCCTGACACCGGTAGATTTTCACTTAT
CTAACAGATCCTGTGTTCTTTATATCACCGAAGCTGATTTAGTGGCAGGAAATGCCTACAGAAAGAGGCTGGTTCGTGTT
AGAAATGCCAGTAATCTTCAAGGTATTGTACTAGTTGAAAAAACACAGATGAGTGAACAATACTTCCCAGCAGTGCAAAA
GTTTACTGTGCTGGACCTTGGGATGGTGTTGCTGCCAGTAGCCAGCCAGGTGGAAGCAGCCTGCCTGATTGTCCAATTAG
TCCAGGAACAAACCAAGGAGCACAGTAAGAACCCTTTTCTCAGGAAGAAACGGGCTCTGCTCTCTGAGCCATCCCTCCTT
CGAACTGTACAGCAGATCCCTGGAGTTGGAAAAGTTAAAGCTCCCCTTCTGCTTCAGAAATTCCCAAGTATCCAACAACT
AAGTAATGCTTCCATCCAAGAACTCGAGCAGGTGGTTGGACAAGCAGCAGCACAGCAAATTTATGTGTTCTTCACACAGT
CCAGGTGA
ATGGAAAGCGGACCCCCTGTTGCCACGGGCCCCATAGACGTGCCTTTGGGGCACATTGTGGCCAATGAGAAATGGCGCGG
GTCGCAGCTGGCCCTGGGGATGCAAGGGAAAATTAAACTCACTTTTGAGGATGGCCTGACACCGGTAGATTTTCACTTAT
CTAACAGATCCTGTGTTCTTTATATCACCGAAGCTGATTTAGTGGCAGGAAATGCCTACAGAAAGAGGCTGGTTCGTGTT
AGAAATGCCAGTAATCTTCAAGGTATTGTACTAGTTGAAAAAACACAGATGAGTGAACAATACTTCCCAGCAGTGCAAAA
GTTTACTGTGCTGGACCTTGGGATGGTGTTGCTGCCAGTAGCCAGCCAGGTGGAAGCAGCCTGCCTGATTGTCCAATTAG
TCCAGGAACAAACCAAGGAGCACAGTAAGAACCCTTTTCTCAGGAAGAAACGGGCTCTGCTCTCTGAGCCATCCCTCCTT
CGAACTGTACAGCAGATCCCTGGAGTTGGAAAAGTTAAAGCTCCCCTTCTGCTTCAGAAATTCCCAAGTATCCAACAACT
AAGTAATGCTTCCATCCAAGAACTCGAGCAGGTGGTTGGACAAGCAGCAGCACAGCAAATTTATGTGTTCTTCACACAGT
CCAGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 5 .64 RPM |
| SRP012922_cerebellum | 6 .74 RPM |
| SRP012922_heart | 0 .46 RPM |
| SRP012922_kidney | 2 .74 RPM |
| SRP012922_liver | 2 .17 RPM |
| SRP012922_lung | 3 .36 RPM |
| SRP012922_quadricep_muscle | 0 .87 RPM |
| SRP012922_spleen | 6 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000728 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011965 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002716 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000006401 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013287 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017939 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000009727 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016372 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_426 | 56.91 | 82.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_942 | 75.23 | 99.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1817 | 56.35 | 82.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2382 | 59.24 | 82.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000014134 retrocopies