Parental gene: | TSPAN5, ENSDNOG00000012685 |
| Aliases: | None |
| Description: | tetraspanin 5 [Source:HGNC Symbol;Acc:17753] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2519:12839..56127(-) |
>ENSDNOG00000012685
TTTTTGGGAATAGCATTTCTTGGAATTGGACTGTGGGCATGGAATGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTGTGTTCCTGGGGATTATTTTCTTCCTGGAGCTCACT
GCTGGGGTTCTGGCGTTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCGTA
CAGGGATGATATTGATTTGCAGAACCTCATAGACTTCACCCAAGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGATG
ATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAACGCAAGTCGAGAGCGATGCGGCGTGCCATTCTCCTGCTGT
ACTAAAGATCCTGCAGAAGATGTCATCAACACTCAGTGTGGCTATGATGCCAGGCAAAAGCCAGAAGTTGATCAGCAGAT
TGTCATCTACACGAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTACAGGACAATTTAACCATCGTGGCTGGTATTTTCA
TAGGCATTGCATTGCTGCAGATTTTTGGGATATGCCTGGCCCAGAATTTGGTTAGTGATATTGAAGCTGTCAGGGCTAGC
TGGTAG
TTTTTGGGAATAGCATTTCTTGGAATTGGACTGTGGGCATGGAATGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTGTGTTCCTGGGGATTATTTTCTTCCTGGAGCTCACT
GCTGGGGTTCTGGCGTTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCGTA
CAGGGATGATATTGATTTGCAGAACCTCATAGACTTCACCCAAGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGATG
ATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAACGCAAGTCGAGAGCGATGCGGCGTGCCATTCTCCTGCTGT
ACTAAAGATCCTGCAGAAGATGTCATCAACACTCAGTGTGGCTATGATGCCAGGCAAAAGCCAGAAGTTGATCAGCAGAT
TGTCATCTACACGAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTACAGGACAATTTAACCATCGTGGCTGGTATTTTCA
TAGGCATTGCATTGCTGCAGATTTTTGGGATATGCCTGGCCCAGAATTTGGTTAGTGATATTGAAGCTGTCAGGGCTAGC
TGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .92 RPM |
| SRP012922_cerebellum | 16 .63 RPM |
| SRP012922_heart | 0 .93 RPM |
| SRP012922_kidney | 4 .93 RPM |
| SRP012922_liver | 0 .77 RPM |
| SRP012922_lung | 4 .73 RPM |
| SRP012922_quadricep_muscle | 0 .87 RPM |
| SRP012922_spleen | 10 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013851 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010287 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013549 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007532 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007405 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003024 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_91 | 64.00 | 72.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000012685 retrocopies