Parental gene: | ZSCAN4, ENSDNOG00000011483 |
| Aliases: | None |
| Description: | zinc finger and SCAN domain containing 4 [Source:HGNC Symbol;Acc:23709] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_65960:3690..6056(+) |
>ENSDNOG00000011483
ATGGCTTTAGATCTCAGAACTTCCTTTCGACATGACCCATCCAGGAGTGGTCATCCTGGGTCACACAATCTAGAGCTTGA
ACCTACCCAAGGATGTGATCTCCAGAGGAGAGAGGGGAACTCTAAGTTCCAGGGCCCTCAGCTCAGCTTATATCAAACCA
GCAATGGCTCATTTGCAAAGCAGGAACTAAAAAGACTCCGTAAGGTATTTCACTTGTGGCTGCAGCCAGAAAAACACAGC
AAGGAAGAAATTATTTCTCAATTGATACTGGAACAGCTTGTGATGAATGGATACTGCAGGAACAGGTCCATTTTGAAAGA
AAAATGGGATTCAAGTGGAAGAAATCTGGAAAAACTCGTGGGAGAGCTGAATGATGATTGCATGAAGTCACCTGATTTTG
TCCATGTCCACATGCAGGGACAGGAAGCCCTCTTCTCAGAGAATATGCCCTTAAGAGAAGTCATTTATCTCATGGAACAA
ATGCCAGCAGGAACCCCAAGAGGAGAGAGCATGAGGACACCCTTCCAAGGTCCCCAAAATATTCCCCTTCAAACAGGACA
TGGAGATGAATATAAAGATGACAGCAACATTTTTGTGAAACGCAATCAAATTAATGTCAATATTACTAGTCAAGGAAATC
AAGTACCTTATGTGGTTATTATTCAGGAAGATGATAGCCCTAAGCCTGAAGAGGGGAGTGGTTCTTGGAAGAACCTGCAC
AACTTTAGAAGAGCAGAGCTTGGCTCCCCCACATCCCAGGAAGGATCCCTAGGAGAATCCTCTTCTCAAGATGTCCCTAT
GGAGGTGGAAACGCAGTTTCTTCCCAGGACAGATCAAGCCAGCCCTAAGCCTGCCCTTACCAATCAAAGCAGTGATGGAA
CATCCAGATGTGGGATAAACCAAGAAAGAGTCCACAGTCCCCCAAAGTCATACAAATGTGAGGACTGTCCCAGGATCTTC
AGGTTTCCCTCTCAGCTAGAAGCCCACCAGAGAAGACACAGGAATGAAAGGCCATTTGTTTGCACTGAGTGTCACAAAGG
TTTCTTCCAGACATCAGACCTCCACGTGCACCAGAAGATTCACATGGCGGAGAAGCCCTTCAGGTGCAGCTCGTGTGAAA
GATCCTTCAGCCACAAAACCAACTTGCTAGCTCATGAGAGAATCCACTCTGGAGATAAGCCCTATGTGTGTTCCCTTTGC
AAAAAGAGCTACCGCCAGTCATCCACATACCACCGTCATGTGCGGATGCACCAGAAAATTAATCTCAAAAGTGATTCTGC
CACTCCAGAAGCTTCCTCA
ATGGCTTTAGATCTCAGAACTTCCTTTCGACATGACCCATCCAGGAGTGGTCATCCTGGGTCACACAATCTAGAGCTTGA
ACCTACCCAAGGATGTGATCTCCAGAGGAGAGAGGGGAACTCTAAGTTCCAGGGCCCTCAGCTCAGCTTATATCAAACCA
GCAATGGCTCATTTGCAAAGCAGGAACTAAAAAGACTCCGTAAGGTATTTCACTTGTGGCTGCAGCCAGAAAAACACAGC
AAGGAAGAAATTATTTCTCAATTGATACTGGAACAGCTTGTGATGAATGGATACTGCAGGAACAGGTCCATTTTGAAAGA
AAAATGGGATTCAAGTGGAAGAAATCTGGAAAAACTCGTGGGAGAGCTGAATGATGATTGCATGAAGTCACCTGATTTTG
TCCATGTCCACATGCAGGGACAGGAAGCCCTCTTCTCAGAGAATATGCCCTTAAGAGAAGTCATTTATCTCATGGAACAA
ATGCCAGCAGGAACCCCAAGAGGAGAGAGCATGAGGACACCCTTCCAAGGTCCCCAAAATATTCCCCTTCAAACAGGACA
TGGAGATGAATATAAAGATGACAGCAACATTTTTGTGAAACGCAATCAAATTAATGTCAATATTACTAGTCAAGGAAATC
AAGTACCTTATGTGGTTATTATTCAGGAAGATGATAGCCCTAAGCCTGAAGAGGGGAGTGGTTCTTGGAAGAACCTGCAC
AACTTTAGAAGAGCAGAGCTTGGCTCCCCCACATCCCAGGAAGGATCCCTAGGAGAATCCTCTTCTCAAGATGTCCCTAT
GGAGGTGGAAACGCAGTTTCTTCCCAGGACAGATCAAGCCAGCCCTAAGCCTGCCCTTACCAATCAAAGCAGTGATGGAA
CATCCAGATGTGGGATAAACCAAGAAAGAGTCCACAGTCCCCCAAAGTCATACAAATGTGAGGACTGTCCCAGGATCTTC
AGGTTTCCCTCTCAGCTAGAAGCCCACCAGAGAAGACACAGGAATGAAAGGCCATTTGTTTGCACTGAGTGTCACAAAGG
TTTCTTCCAGACATCAGACCTCCACGTGCACCAGAAGATTCACATGGCGGAGAAGCCCTTCAGGTGCAGCTCGTGTGAAA
GATCCTTCAGCCACAAAACCAACTTGCTAGCTCATGAGAGAATCCACTCTGGAGATAAGCCCTATGTGTGTTCCCTTTGC
AAAAAGAGCTACCGCCAGTCATCCACATACCACCGTCATGTGCGGATGCACCAGAAAATTAATCTCAAAAGTGATTCTGC
CACTCCAGAAGCTTCCTCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 0 .00 RPM |
| SRP012922_cerebellum | 0 .14 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .00 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005419 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000015200 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003257 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023779 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_174 | 74.71 | 78.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_859 | 55.68 | 60.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_964 | 68.16 | 50.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1048 | 60.59 | 70.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1253 | 57.52 | 51.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_1287 | 63.72 | 74.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_1505 | 78.10 | 78.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_1780 | 99.40 | 76.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_2499 | 59.61 | 57.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_2556 | 61.08 | 76.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_2666 | 62.08 | 54.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011483 retrocopies