Parental gene:

CLNS1A, ENSDNOG00000008188

Aliases:None
Description:chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6133:89966..96230(-)


>ENSDNOG00000008188
CGCCTGTCTTGGTTAGATGGCTCTGGATTAGGATTCTCTCTGGAATACCCCACCATTAGTTTACATGCTGTGTCCAGGGA
CCTAAGTGCCTATCCACGAGAACATTTGTATGTTATGGTGAATGCCAAATTTGGAGAAGAATCAAAAGAATCTGTTGCTG
ATGAAGAAGATGAAGATAAAGATGATGATGATGAACCTATTGCTGAGTTTAGATTTGTTCCTAGTGATAAATCAGCATTG
GAAGCAATGTTCACTGCAATGTGTGAATGCCAGGCTTTGCACCCAGATCCTGAGGATGAAGATTCAGATGATTATGATGG
AGAAGAATATGATGTGGAAGCACATGAACAAGGGCAGGGGGACATCCCTACATTTTACACCTATGAAGAAGGACTATCCC
ATTTAACAGCAGAAGGCCAAGCCACATTAGAGAGATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAACATG
GCTGGAGTCCGGACAGAAGACTCAATAAGAGATTATGAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 13 .03 RPM
SRP012922_cerebellum 10 .45 RPM
SRP012922_heart 6 .26 RPM
SRP012922_kidney 7 .94 RPM
SRP012922_liver 4 .80 RPM
SRP012922_lung 11 .45 RPM
SRP012922_quadricep_muscle 6 .40 RPM
SRP012922_spleen 14 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004900 ortholog_one2many 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Choloepus hoffmanni ENSCHOG00000007254 ortholog_one2one 1 retrogene
retro_chof_1685,
Callithrix jacchus ENSCJAG00000014927 possible_ortholog 1 retrogene
retro_cjac_4085,
Cavia porcellus ENSCPOG00000005260 possible_ortholog 1 retrogene
retro_cpor_67,
Felis catus ENSFCAG00000026321 ortholog_one2many 1 retrogene
retro_fcat_736,
Macropus eugenii ENSMEUG00000005935 ortholog_one2one 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Myotis lucifugus ENSMLUG00000024623 ortholog_one2one 2 retrogenes
retro_mluc_1501, retro_mluc_1507,
Mustela putorius furo ENSMPUG00000015944 ortholog_one2one 1 retrogene
retro_mputfur_435,
Oryctolagus cuniculus ENSOCUG00000024393 possible_ortholog 1 retrogene
retro_ocun_1303,
Tupaia belangeri ENSTBEG00000001316 ortholog_one2one 1 retrogene
retro_tbel_2975,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_477 81.25 54.91
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Download FASTA sequences of all ENSDNOG00000008188 retrocopies