Parental gene: | GNPDA1, ENSDNOG00000007804 |
| Aliases: | None |
| Description: | glucosamine-6-phosphate deaminase 1 [Source:HGNC Symbol;Acc:4417] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_17039:511..10120(-) |
>ENSDNOG00000007804
ATGAAGCTTATCATCCTCGACGACTATTCTCAGGCCAGTGAGTGGGCAGCCAAGTACATCAGGAACCGCATCATCCAGTT
TAACCCAGGGCCAGACAAGTACTTCACCCTGGGGCTCCCCACTGGGAGCACCCCTCTTGGCTGCTACAAGAAGTTGATTG
AATACTATAAGAACGGAGACCTGTCCTTCAAATATGTAAAGACCTTCAACATGGACGAGTATGTGGGCCTTCCTCGAGAC
CACCCAGAGAGTTACCACTCCTTCATGTGGAACAACTTCTTCAAGCACATTGACATCCACCCAGGAAATACCTATATCCT
GGATGGGAATGCAGCTGACCTGCAGGCTGAGTGTGAGTCCTTTGAAGAGAAGATCACAGCTGCAGGCGGGATTGAGCTGT
TTGTTGGAGGCATTGGCCCCGACGGACACATCGCCTTCAACGAGCCGGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAG
ACACTGGCCATGGACACCATCCTGGCCAACGCCAGGTTCTTCAATGGGGAGCTCGCCAGGGTGCCCACCATGGCCCTGAC
GGTGGGCGTGGGCACCATCATGGATGCTCGGGAGGTGATGATCCTCATCACGGGTGCGCACAAGGCGTTTGCTCTGTACA
AGGCCATTGAGGAGGGCGTGAGCCACATGTGGACTGTGTCTGCCTTCCAGCAGCATCCCCGCACAGTGTTCGTGTGTGAC
GAGGATGCCACCCTCGAGCTCAAAGTGAAGACTGTCAAGTATTTCAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGGA
CCCCTTGTACAGTATCAAAGAGAAGGAAACAGAGAAAAGCCAATCTTCCAAGACACCATACAGCGATTAG
ATGAAGCTTATCATCCTCGACGACTATTCTCAGGCCAGTGAGTGGGCAGCCAAGTACATCAGGAACCGCATCATCCAGTT
TAACCCAGGGCCAGACAAGTACTTCACCCTGGGGCTCCCCACTGGGAGCACCCCTCTTGGCTGCTACAAGAAGTTGATTG
AATACTATAAGAACGGAGACCTGTCCTTCAAATATGTAAAGACCTTCAACATGGACGAGTATGTGGGCCTTCCTCGAGAC
CACCCAGAGAGTTACCACTCCTTCATGTGGAACAACTTCTTCAAGCACATTGACATCCACCCAGGAAATACCTATATCCT
GGATGGGAATGCAGCTGACCTGCAGGCTGAGTGTGAGTCCTTTGAAGAGAAGATCACAGCTGCAGGCGGGATTGAGCTGT
TTGTTGGAGGCATTGGCCCCGACGGACACATCGCCTTCAACGAGCCGGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAG
ACACTGGCCATGGACACCATCCTGGCCAACGCCAGGTTCTTCAATGGGGAGCTCGCCAGGGTGCCCACCATGGCCCTGAC
GGTGGGCGTGGGCACCATCATGGATGCTCGGGAGGTGATGATCCTCATCACGGGTGCGCACAAGGCGTTTGCTCTGTACA
AGGCCATTGAGGAGGGCGTGAGCCACATGTGGACTGTGTCTGCCTTCCAGCAGCATCCCCGCACAGTGTTCGTGTGTGAC
GAGGATGCCACCCTCGAGCTCAAAGTGAAGACTGTCAAGTATTTCAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGGA
CCCCTTGTACAGTATCAAAGAGAAGGAAACAGAGAAAAGCCAATCTTCCAAGACACCATACAGCGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 27 .42 RPM |
| SRP012922_cerebellum | 3 .85 RPM |
| SRP012922_heart | 2 .09 RPM |
| SRP012922_kidney | 24 .09 RPM |
| SRP012922_liver | 13 .00 RPM |
| SRP012922_lung | 5 .80 RPM |
| SRP012922_quadricep_muscle | 1 .56 RPM |
| SRP012922_spleen | 18 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007865 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009884 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000015442 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010398 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000052102 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007303 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000016508 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003330 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_508 | 89.38 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1363 | 59.01 | 54.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1608 | 74.04 | 96.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000007804 retrocopies