Parental gene: | KCMF1, ENSDNOG00000006752 |
| Aliases: | None |
| Description: | potassium channel modulatory factor 1 [Source:HGNC Symbol;Acc:20589] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6053:13790..105382(+) |
>ENSDNOG00000006752
ATTTCTAGTCATTTTGGTGTCAGCTGTGATGCACGTTTAAAAGGAAATTTTCGAGGTCGCACATATAAGTGTTTAGTTTG
CTACGATTACGATCTTTGTGCTTCTTGTTATGAAAGTGGTGCAAAGAAAACAAGGCATACAACTGACCACCCAATGCAGT
GTATATTAACAAGGGTAAATGATTTATACTATGGTGGGGAAGCTTTTTCTGTAGAGCAGCCACAGTCTTTTACTTGTCCC
TATTGTGGAAAAATGGGCTATACGGAGACATCTCTTCAAGAACATGTTACTTCTGAACACGCAGAAACATCAACAGAAGT
GATCTGTCCGATCTGCGCGGCGTTACCTGGAGGCGATCCGAATCACGTCACGGACGACTTCGCAGCTCATCTTACCCTGG
AGCACAGAGCCCCTAGAGATTTAGATGAATCGAGTGGTGTTCGACATGTACGTAGAATGTTTCACCCTGACCGGAGACTA
GGAGGTCCTCGTGCTCGTAGATCAAACATGCACTTTACTAGCAGTTCTACTGGTAGACTTTCTTCTTCTCAGAGTTCATA
TTCTCCAAGCAATAGGGAAGCCATGGATCCCATAGCTGCAGAGCTTTTGTCTCAGTTATCAGGAGTGAGACGTTCTGCAG
GAGGACAACTTAATTCTTCCGGCCCTTCCGCTTCTCAGTTACAGCAACTGCAGATGCAGCTGCAGCTGGAACGGCAGCAC
GCCCAGGCAGCACGGCAGCAGCTGGAGACTGCACGCAACGCAACCCGGCGTACCAACACAAGCAGCGTCACCACTACAAT
CACACAGTCCACAGCCACAACCAACACAGCTAATACAGAAAGCAGCCAACAGACTCTCCAGAACTCACAGTTTCTTTTAA
CAAGGTTGAATGATCCTAAAATGTCTGAGACAGAGCGCCAGTCCATGGAAAGCGAGCGCGCAGACCGCAGCCTGTTTGTC
CAGGAGCTCCTTCTGTCCACTTTAGTGCGCGAAGAGAGCTCGTCCTCAGACGAGGATGACCGGGGGGAGATGGCAGATTT
TGGTGCTATGGGCTGTGTAGATATTATGCCTTTAGATGTTGCTTTAGAAAACCTAAATTTAAAAGAGAGTAATAAAGGAA
ATGAGCCTCCACCACCTCCTCTTTGA
ATTTCTAGTCATTTTGGTGTCAGCTGTGATGCACGTTTAAAAGGAAATTTTCGAGGTCGCACATATAAGTGTTTAGTTTG
CTACGATTACGATCTTTGTGCTTCTTGTTATGAAAGTGGTGCAAAGAAAACAAGGCATACAACTGACCACCCAATGCAGT
GTATATTAACAAGGGTAAATGATTTATACTATGGTGGGGAAGCTTTTTCTGTAGAGCAGCCACAGTCTTTTACTTGTCCC
TATTGTGGAAAAATGGGCTATACGGAGACATCTCTTCAAGAACATGTTACTTCTGAACACGCAGAAACATCAACAGAAGT
GATCTGTCCGATCTGCGCGGCGTTACCTGGAGGCGATCCGAATCACGTCACGGACGACTTCGCAGCTCATCTTACCCTGG
AGCACAGAGCCCCTAGAGATTTAGATGAATCGAGTGGTGTTCGACATGTACGTAGAATGTTTCACCCTGACCGGAGACTA
GGAGGTCCTCGTGCTCGTAGATCAAACATGCACTTTACTAGCAGTTCTACTGGTAGACTTTCTTCTTCTCAGAGTTCATA
TTCTCCAAGCAATAGGGAAGCCATGGATCCCATAGCTGCAGAGCTTTTGTCTCAGTTATCAGGAGTGAGACGTTCTGCAG
GAGGACAACTTAATTCTTCCGGCCCTTCCGCTTCTCAGTTACAGCAACTGCAGATGCAGCTGCAGCTGGAACGGCAGCAC
GCCCAGGCAGCACGGCAGCAGCTGGAGACTGCACGCAACGCAACCCGGCGTACCAACACAAGCAGCGTCACCACTACAAT
CACACAGTCCACAGCCACAACCAACACAGCTAATACAGAAAGCAGCCAACAGACTCTCCAGAACTCACAGTTTCTTTTAA
CAAGGTTGAATGATCCTAAAATGTCTGAGACAGAGCGCCAGTCCATGGAAAGCGAGCGCGCAGACCGCAGCCTGTTTGTC
CAGGAGCTCCTTCTGTCCACTTTAGTGCGCGAAGAGAGCTCGTCCTCAGACGAGGATGACCGGGGGGAGATGGCAGATTT
TGGTGCTATGGGCTGTGTAGATATTATGCCTTTAGATGTTGCTTTAGAAAACCTAAATTTAAAAGAGAGTAATAAAGGAA
ATGAGCCTCCACCACCTCCTCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 36 .95 RPM |
| SRP012922_cerebellum | 31 .34 RPM |
| SRP012922_heart | 40 .14 RPM |
| SRP012922_kidney | 28 .47 RPM |
| SRP012922_liver | 19 .04 RPM |
| SRP012922_lung | 45 .21 RPM |
| SRP012922_quadricep_muscle | 112 .68 RPM |
| SRP012922_spleen | 49 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005786 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001809 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000979 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015567 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034863 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000010386 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1000 | 59.33 | 52.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2063 | 66.35 | 53.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000006752 retrocopies